RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 S4R3C0 116 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 CCDC168Q8NDH2 2452 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 TRAV30A0A087WSZ9 112 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 F2Z2F3 143 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 GNG7O60262 68 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 TOX4O94842 621 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 IL4P05112 153 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 RASL11AQ6T310 242 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 BPIFA4PQ86YQ2 179 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 WIPF2Q8TF74 440 aaPredicted RBP10.95□□□□□ -0.66
MSH2-206ENST00000543555 TSKUQ8WUA8 353 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 ZNF48Q96MX3 618 aaPredicted RBP10.95□□□□□ -0.66
MSH2-206ENST00000543555 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 ZNF331Q9NQX6 463 aaPredicted RBP10.95□□□□□ -0.66
MSH2-206ENST00000543555 WI2-2373I1.2A0A1W2PRP0 233 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 MFAP4P55083 255 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 PAFAH1B2P68402 229 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 IQCJQ1A5X6 159 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 GNB4Q9HAV0 340 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 TPPP2P59282 170 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 KIAA1644Q3SXP7 199 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 TBX15Q96SF7 602 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 NEU1Q99519 415 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 BPESC1Q9GZL8 116 aa10.94□□□□□ -0.66
MSH2-206ENST00000543555 BMPR1BO00238 502 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 UBE2E1P51965 193 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 LMO4P61968 165 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 LINC00322Q6ZN03 302 aaPredicted RBP10.93□□□□□ -0.66
MSH2-206ENST00000543555 OR4F17Q8NGA8 305 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 RNF24Q9Y225 148 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 ITPR2Q14571 2701 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 TRBV19A0A075B6N1 114 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 IGLC2P0DOY2 106 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 FAM209BQ5JX69 171 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
MSH2-206ENST00000543555 APCSP02743 223 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 OR10J3Q5JRS4 329 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 Q86TA4 180 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 ZNF664Q8N3J9 261 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 PRSS22Q9GZN4 317 aa10.93□□□□□ -0.66
MSH2-206ENST00000543555 APCP25054 2843 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 ZFHX3Q15911 3703 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 IGHV7-81A0A0B4J1V7 117 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 C19orf71A6NCJ1 209 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 FAM106CPP0CH98 169 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 PAX1P15863 534 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 AJUBAQ96IF1 538 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 RPP21Q9H633 154 aaKnown RBP10.92□□□□□ -0.66
MSH2-206ENST00000543555 C21orf62Q9NYP8 219 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 THYN1Q9P016 225 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 MRPS12O15235 138 aaKnown RBP10.92□□□□□ -0.66
MSH2-206ENST00000543555 HLA-DRB1P01911 266 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 PLA2G2AP14555 144 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 DDTP30046 118 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 SRIP30626 198 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 DEFA6Q01524 100 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 Q56UQ5 140 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 Q8N9W7 124 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 C17orf77Q96MU5 243 aa10.92□□□□□ -0.66
MSH2-206ENST00000543555 ABCA1O95477 2261 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 TRAV8-1A0A0A6YYK1 113 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 NDUFB8O95169 186 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 SCGB1D1O95968 90 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 EGR2P11161 476 aaPredicted RBP10.91□□□□□ -0.66
MSH2-206ENST00000543555 FCGR2BP31994 310 aaPredicted RBP10.91□□□□□ -0.66
MSH2-206ENST00000543555 SLAQ13239 276 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 CT83Q5H943 113 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 FAM120AOSQ5T036 256 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 SIGLEC15Q6ZMC9 328 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 GOLT1AQ6ZVE7 132 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 C1RLQ9NZP8 487 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 NAV2Q8IVL1 2488 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 OVOL3O00110 214 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 GDF5OSQ5U4N7 250 aa10.91□□□□□ -0.66
MSH2-206ENST00000543555 VWC2LB2RUY7 222 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 OR2J3O76001 311 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 P01737 135 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 BRS3P32247 399 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 SAA4P35542 130 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 Q6ZWC4 215 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 S100A7AQ86SG5 101 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 BCL6BQ8N143 479 aaPredicted RBP10.9□□□□□ -0.66
MSH2-206ENST00000543555 LYPD1Q8N2G4 141 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 ZANQ9Y493 2812 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 TRBV6-1A0A0K0K1D8 114 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 ZNF253O75346 499 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 ATP5L2Q7Z4Y8 100 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 ZNF414Q96IQ9 312 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 SAMD10Q9BYL1 202 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 NAGKQ9UJ70 344 aa10.9□□□□□ -0.66
MSH2-206ENST00000543555 TCF24Q7RTU0 167 aa10.9□□□□□ -0.67
MSH2-206ENST00000543555 PRNTQ86SH4 94 aa10.9□□□□□ -0.67
MSH2-206ENST00000543555 DAZAP1Q96EP5 407 aaKnown RBP10.9□□□□□ -0.67
MSH2-206ENST00000543555 HSPB9Q9BQS6 159 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms