RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 RPL7P18124 248 aaKnown RBP17.46■□□□□ 0.39
HOMER3-205ENST00000542541 LEMD1Q68G75 181 aa17.46■□□□□ 0.39
HOMER3-205ENST00000542541 TCF24Q7RTU0 167 aa17.46■□□□□ 0.39
HOMER3-205ENST00000542541 GLMPQ8WWB7 406 aa17.46■□□□□ 0.39
HOMER3-205ENST00000542541 PHYHIPLQ96FC7 376 aa17.46■□□□□ 0.39
HOMER3-205ENST00000542541 RPRMQ9NS64 109 aa17.46■□□□□ 0.39
HOMER3-205ENST00000542541 TRAV25A0A0B4J276 109 aa17.45■□□□□ 0.38
HOMER3-205ENST00000542541 WIPF1O43516 503 aa17.45■□□□□ 0.38
HOMER3-205ENST00000542541 RPL11P62913 178 aaKnown RBP17.45■□□□□ 0.38
HOMER3-205ENST00000542541 CD300EQ496F6 205 aaPredicted RBP17.45■□□□□ 0.38
HOMER3-205ENST00000542541 SIGLEC15Q6ZMC9 328 aa17.45■□□□□ 0.38
HOMER3-205ENST00000542541 GALR1P47211 349 aa17.44■□□□□ 0.38
HOMER3-205ENST00000542541 TAS2R45P59539 299 aa17.44■□□□□ 0.38
HOMER3-205ENST00000542541 LCN12Q6JVE5 192 aa17.44■□□□□ 0.38
HOMER3-205ENST00000542541 FAM122CQ6P4D5 195 aa17.44■□□□□ 0.38
HOMER3-205ENST00000542541 BPIFA4PQ86YQ2 179 aa17.44■□□□□ 0.38
HOMER3-205ENST00000542541 RPP25LQ8N5L8 163 aaKnown RBP17.44■□□□□ 0.38
HOMER3-205ENST00000542541 ACTR3CQ9C0K3 210 aaPredicted RBP17.44■□□□□ 0.38
HOMER3-205ENST00000542541 NOTCH3Q9UM47 2321 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 MORN5Q5VZ52 161 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 FAM90A2PQ658T7 463 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 CDC34P49427 236 aaPredicted RBP17.43■□□□□ 0.38
HOMER3-205ENST00000542541 RAB5CP51148 216 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 PAFAH1B2P68402 229 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 MIR17HGQ75NE6 70 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 TMEM61Q8N0U2 210 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 STXBP6Q8NFX7 210 aa17.43■□□□□ 0.38
HOMER3-205ENST00000542541 ZMAT5Q9UDW3 170 aaKnown RBP17.43■□□□□ 0.38
HOMER3-205ENST00000542541 TRAV5A0A0B4J249 113 aa17.42■□□□□ 0.38
HOMER3-205ENST00000542541 TSPAN4O14817 238 aa17.42■□□□□ 0.38
HOMER3-205ENST00000542541 OXLD1Q5BKU9 147 aa17.42■□□□□ 0.38
HOMER3-205ENST00000542541 SPATA31B1PQ5VZV4 182 aa17.42■□□□□ 0.38
HOMER3-205ENST00000542541 DPPA3Q6W0C5 159 aa17.42■□□□□ 0.38
HOMER3-205ENST00000542541 SELENOKQ9Y6D0 94 aa17.42■□□□□ 0.38
HOMER3-205ENST00000542541 KHDC3LQ587J8 217 aa17.41■□□□□ 0.38
HOMER3-205ENST00000542541 RAB24Q969Q5 203 aa17.41■□□□□ 0.38
HOMER3-205ENST00000542541 ZNF785A8K8V0 405 aa17.4■□□□□ 0.38
HOMER3-205ENST00000542541 TMEM14CQ9P0S9 112 aa17.4■□□□□ 0.38
HOMER3-205ENST00000542541 ATF4P18848 351 aaPredicted RBP17.39■□□□□ 0.38
HOMER3-205ENST00000542541 SPAG8Q99932 426 aaPredicted RBP17.39■□□□□ 0.38
HOMER3-205ENST00000542541 SLC25A2Q9BXI2 301 aa17.39■□□□□ 0.38
HOMER3-205ENST00000542541 PLA2G2EQ9NZK7 142 aa17.39■□□□□ 0.38
HOMER3-205ENST00000542541 CTXND1A0A1B0GTU2 59 aa17.39■□□□□ 0.37
HOMER3-205ENST00000542541 DNASE2O00115 360 aaPredicted RBP17.39■□□□□ 0.37
HOMER3-205ENST00000542541 MEOX2P50222 304 aa17.39■□□□□ 0.37
HOMER3-205ENST00000542541 PQLC2Q6ZP29 291 aa17.39■□□□□ 0.37
HOMER3-205ENST00000542541 FAM167A-AS1Q96KT0 104 aa17.39■□□□□ 0.37
HOMER3-205ENST00000542541 OR51M1Q9H341 326 aa17.39■□□□□ 0.37
HOMER3-205ENST00000542541 NRN1Q9NPD7 142 aa17.39■□□□□ 0.37
HOMER3-205ENST00000542541 IGKV3-7A0A075B6H7 116 aa17.38■□□□□ 0.37
HOMER3-205ENST00000542541 OR7C2O60412 319 aa17.38■□□□□ 0.37
HOMER3-205ENST00000542541 SULT1A2P50226 295 aa17.38■□□□□ 0.37
HOMER3-205ENST00000542541 GUCA2BQ16661 112 aa17.38■□□□□ 0.37
HOMER3-205ENST00000542541 ALKAL2Q6UX46 152 aa17.38■□□□□ 0.37
HOMER3-205ENST00000542541 FAM213BQ8TBF2 198 aa17.38■□□□□ 0.37
HOMER3-205ENST00000542541 MS4A6AQ9H2W1 248 aa17.38■□□□□ 0.37
HOMER3-205ENST00000542541 IZUMO1RA6ND01 250 aa17.37■□□□□ 0.37
HOMER3-205ENST00000542541 STAG3L2P0CL84 134 aa17.37■□□□□ 0.37
HOMER3-205ENST00000542541 STAG3L3P0CL85 134 aa17.37■□□□□ 0.37
HOMER3-205ENST00000542541 SAMD13Q5VXD3 122 aa17.37■□□□□ 0.37
HOMER3-205ENST00000542541 PAXXQ9BUH6 204 aa17.37■□□□□ 0.37
HOMER3-205ENST00000542541 SMAD5-AS1Q9Y6J3 95 aa17.37■□□□□ 0.37
HOMER3-205ENST00000542541 TRAV2A0A0B4J234 112 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 OR4C46A6NHA9 309 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 MRPS12O15235 138 aaKnown RBP17.36■□□□□ 0.37
HOMER3-205ENST00000542541 GP9P14770 177 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 GUK1Q16774 197 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 SAMD5Q5TGI4 173 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 GBGT1Q8N5D6 347 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 HRH4Q9H3N8 390 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 HIST1H1EP10412 219 aaKnown RBP17.36■□□□□ 0.37
HOMER3-205ENST00000542541 FHITP49789 147 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 RNF141Q8WVD5 230 aa17.36■□□□□ 0.37
HOMER3-205ENST00000542541 A0A087X0K7 114 aa17.35■□□□□ 0.37
HOMER3-205ENST00000542541 G3V4G9 280 aa17.35■□□□□ 0.37
HOMER3-205ENST00000542541 HMGB3O15347 200 aaKnown RBP17.35■□□□□ 0.37
HOMER3-205ENST00000542541 CXorf1O96002 111 aa17.35■□□□□ 0.37
HOMER3-205ENST00000542541 IGLC2P0DOY2 106 aa17.35■□□□□ 0.37
HOMER3-205ENST00000542541 ZNF726P1Q15940 193 aa17.35■□□□□ 0.37
HOMER3-205ENST00000542541 TEX261Q6UWH6 196 aa17.35■□□□□ 0.37
HOMER3-205ENST00000542541 PYYP10082 97 aa17.34■□□□□ 0.37
HOMER3-205ENST00000542541 TFPI2P48307 235 aa17.34■□□□□ 0.37
HOMER3-205ENST00000542541 EGFEM1PQ0D2K5 195 aa17.34■□□□□ 0.37
HOMER3-205ENST00000542541 WFDC3Q8IUB2 231 aa17.34■□□□□ 0.37
HOMER3-205ENST00000542541 MAP1LC3B2A6NCE7 125 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 EIF3GO75821 320 aaKnown RBP eCLIP17.33■□□□□ 0.37
HOMER3-205ENST00000542541 IFNA7P01567 189 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 H2AFB1P0C5Y9 115 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 ARL14EPLP0DKL9 152 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 FAM74A1Q5RGS3 127 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 LCN15Q6UWW0 184 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 LRRC20Q8TCA0 184 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 DCANP1Q8TF63 244 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 MAP1LC3BQ9GZQ8 125 aa17.33■□□□□ 0.37
HOMER3-205ENST00000542541 ZNF256Q9Y2P7 627 aaPredicted RBP17.33■□□□□ 0.37
HOMER3-205ENST00000542541 OR10J4P0C629 311 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 NBEAP1P0C6P0 100 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 UBE2L3P68036 154 aaKnown RBP17.32■□□□□ 0.36
HOMER3-205ENST00000542541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 SSX7Q7RTT5 188 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms