RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 CYCSP99999 105 aaKnown RBP12.65□□□□□ -0.38
GPN3-202ENST00000537466 NHLH2Q02577 135 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 PPP1R1CQ8WVI7 109 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 E5RGE8 158 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 H3BMM0 161 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 ISLRO14498 428 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 SPP1P10451 314 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 ID1P41134 155 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 EWSR1Q01844 656 aaKnown RBP eCLIP12.64□□□□□ -0.39
GPN3-202ENST00000537466 GATAD1Q8WUU5 269 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 C20orf173Q96LM9 149 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 GPR82Q96P67 336 aa12.64□□□□□ -0.39
GPN3-202ENST00000537466 MEOX2P50222 304 aa12.63□□□□□ -0.39
GPN3-202ENST00000537466 BAXQ07812 192 aa12.63□□□□□ -0.39
GPN3-202ENST00000537466 PXDC1Q5TGL8 231 aa12.63□□□□□ -0.39
GPN3-202ENST00000537466 MIC13Q5XKP0 118 aa12.63□□□□□ -0.39
GPN3-202ENST00000537466 MORN3Q6PF18 240 aaPredicted RBP12.63□□□□□ -0.39
GPN3-202ENST00000537466 TMEM37Q8WXS4 190 aa12.63□□□□□ -0.39
GPN3-202ENST00000537466 C16orf92Q96LL3 132 aa12.63□□□□□ -0.39
GPN3-202ENST00000537466 RARRES2Q99969 163 aa12.63□□□□□ -0.39
GPN3-202ENST00000537466 HLA-DRB4P13762 266 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 PRR20EP86478 221 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 PRR20CP86479 221 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 PRR20DP86480 221 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 PRR20BP86481 221 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 PRR20AP86496 221 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 RAB31Q13636 194 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 MORN5Q5VZ52 161 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 LINC00305Q7Z4B0 112 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 RNF126Q9BV68 326 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 SAV1Q9H4B6 383 aaPredicted RBP12.62□□□□□ -0.39
GPN3-202ENST00000537466 HLA-DRB4X5D2U9 266 aa12.62□□□□□ -0.39
GPN3-202ENST00000537466 F6UB75 175 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 COX7A2P2O60397 106 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 MPC2O95563 127 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 RPL7P18124 248 aaKnown RBP12.61□□□□□ -0.39
GPN3-202ENST00000537466 FGF7P21781 194 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 FGL1Q08830 312 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 OR5C1Q8NGR4 320 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 SLC25A31Q9H0C2 315 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 CLEC5AQ9NY25 188 aa12.61□□□□□ -0.39
GPN3-202ENST00000537466 TRAV8-2A0A0B4J237 113 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 MRPS12O15235 138 aaKnown RBP12.6□□□□□ -0.39
GPN3-202ENST00000537466 IGKV3-20P01619 116 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 ATF4P18848 351 aaPredicted RBP12.6□□□□□ -0.39
GPN3-202ENST00000537466 CXCL3P19876 107 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 OPCMLQ14982 345 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 SAMD13Q5VXD3 122 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 TENM2Q9NT68 2774 aa12.6□□□□□ -0.39
GPN3-202ENST00000537466 RPL29P47914 159 aaKnown RBP12.59□□□□□ -0.39
GPN3-202ENST00000537466 TMEM41BQ5BJD5 291 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 C10orf113Q5VZT2 155 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 Q6ZRG5 221 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 S100A7AQ86SG5 101 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 RNF182Q8N6D2 247 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 THAP6Q8TBB0 222 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 SLC39A9Q9NUM3 307 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
GPN3-202ENST00000537466 A0A087X0K7 114 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 B2MP61769 119 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 CLINT1Q14677 625 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 NPCDR1Q9BY65 106 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 DNAJC4Q9NNZ3 241 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 RPRMQ9NS64 109 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 PXMP4Q9Y6I8 212 aa12.59□□□□□ -0.39
GPN3-202ENST00000537466 DYNC2H1Q8NCM8 4307 aaKnown RBP12.58□□□□□ -0.4
GPN3-202ENST00000537466 A0A0J9YX75 114 aa12.58□□□□□ -0.4
GPN3-202ENST00000537466 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
GPN3-202ENST00000537466 PET100P0DJ07 73 aa12.58□□□□□ -0.4
GPN3-202ENST00000537466 HLA-DMBP28068 263 aa12.58□□□□□ -0.4
GPN3-202ENST00000537466 FXYD7P58549 80 aa12.58□□□□□ -0.4
GPN3-202ENST00000537466 OR4B1Q8NGF8 309 aa12.58□□□□□ -0.4
GPN3-202ENST00000537466 MBD2Q9UBB5 411 aa12.58□□□□□ -0.4
GPN3-202ENST00000537466 XCL2Q9UBD3 114 aa12.58□□□□□ -0.4
GPN3-202ENST00000537466 TRAV5A0A0B4J249 113 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 DEFB4AO15263 64 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 MPDU1O75352 247 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 NUTF2P61970 127 aaKnown RBP12.57□□□□□ -0.4
GPN3-202ENST00000537466 FCN2Q15485 313 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 FAM78BQ5VT40 261 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 EBLN2Q6P2I7 272 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 OR11H7Q8NGC8 314 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 OR1L4Q8NGR5 311 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
GPN3-202ENST00000537466 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
GPN3-202ENST00000537466 BPIFA4PQ86YQ2 179 aa12.56□□□□□ -0.4
GPN3-202ENST00000537466 ZNF709Q8N972 641 aa12.56□□□□□ -0.4
GPN3-202ENST00000537466 CLUHP3Q96NS8 147 aa12.56□□□□□ -0.4
GPN3-202ENST00000537466 PFDN5Q99471 154 aa12.56□□□□□ -0.4
GPN3-202ENST00000537466 SLC35B3Q9H1N7 401 aa12.56□□□□□ -0.4
GPN3-202ENST00000537466 HSPB11Q9Y547 144 aa12.56□□□□□ -0.4
GPN3-202ENST00000537466 X6R8D5 127 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms