RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 CT45A7P0DMV0 189 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ACP1P24666 158 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 TAS2R45P59539 299 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 GNG3P63215 75 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF77Q15935 545 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 RRN3P1Q2M238 152 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 C12orf74Q32Q52 190 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF672Q499Z4 452 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-216ENST00000534389 C5orf47Q569G3 176 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 CT45A1Q5HYN5 189 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 FAM162BQ5T6X4 162 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ZFAND6Q6FIF0 208 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-216ENST00000534389 FAM159AQ6UWV7 190 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 FAM231DQ6ZW35 169 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ATP6V0E2Q8NHE4 81 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 CT45A3Q8NHU0 189 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ITLN1Q8WWA0 313 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 PATE1Q8WXA2 126 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 NRGNQ92686 78 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 RASL10AQ92737 203 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 SNRNP40Q96DI7 357 aaKnown RBP2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF799Q96GE5 643 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 FAM167A-AS1Q96KT0 104 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF488Q96MN9 340 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-216ENST00000534389 HIGD1BQ9P298 99 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 MUC22E2RYF6 1773 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-216ENST00000534389 PTPRSQ13332 1948 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 GON4LQ3T8J9 2241 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TRBV7-3A0A075B6L6 115 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TRBV20-1A0A075B6N2 111 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 IGKV3D-11A0A0A0MRZ8 115 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TRAV5A0A0B4J249 113 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TRAV4A0A0B4J268 109 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 A0A0G2JNG1 304 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CENPVL3A0A0U1RRI6 287 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 KIR2DS1A0A191URI9 304 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 SRRM4A7MD48 611 aaKnown RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 HIGD1CA8MV81 97 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CCL16O15467 120 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 APOMO95445 188 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CSN3P07498 182 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 PATE4P0C8F1 98 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CT45A10P0DMU9 189 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CYBAP13498 195 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CA6P23280 308 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 KIR2DS4P43632 304 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CXCL12P48061 93 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 NMUP48645 174 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF137PP52743 207 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 FGF12P61328 243 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CACNG7P62955 275 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 HBBP68871 147 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 PAX8Q06710 450 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF816Q0VGE8 651 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 KIR2DS5Q14953 304 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 KIR2DS1Q14954 304 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 LGALS9BQ3B8N2 356 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 IBA57Q5T440 356 aaKnown RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CFAP126Q5VTH2 177 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 LGALS9CQ6DKI2 356 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 Q6P435 159 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TRAT1Q6PIZ9 186 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 Q6ZQT7 251 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 Q6ZS92 163 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 C9orf139Q6ZV77 190 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 ANKRD37Q7Z713 158 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 SBSPONQ8IVN8 264 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CEND1Q8N111 149 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 RBMXL3Q8N7X1 1067 aaKnown RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 C9orf106Q8NAJ2 232 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 PPDPFLQ8WWR9 84 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TMEM158Q8WZ71 300 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 RERGQ96A58 199 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 BORCS8Q96FH0 119 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 PGLYRP4Q96LB8 373 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 CHAC1Q9BUX1 264 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 AKIRIN1Q9H9L7 192 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 PHPT1Q9NRX4 125 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 NHP2Q9NX24 153 aaKnown RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF580Q9UK33 172 aa2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TIMM8BQ9Y5J9 83 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-216ENST00000534389 TRBV25-1A0A075B6N4 114 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 TRAV3A0A0B4J244 114 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 TRAV25A0A0B4J276 109 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 LOC107984640A0A0U1RRK4 108 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 C19orf71A6NCJ1 209 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 SMIM9A6NGZ8 99 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 FCN3O75636 299 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 CEACAM4O75871 244 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 SP1P08047 785 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 DUTP33316 252 aaKnown RBP2.48□□□□□ -2.01
CSDE1-216ENST00000534389 MPV17P39210 176 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 MYCNOSP40205 109 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 FXYD7P58549 80 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 KRTAP10-11P60412 298 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 GNG5P63218 68 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 C1orf61Q13536 156 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms