RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	RIMS1	Q86UR5	1692 aa	Known RBP	0.82	□□□□□ -2.28
RDX-215	ENST00000533961	SCAF11	Q99590	1463 aa	Known RBP	0.82	□□□□□ -2.28
RDX-215	ENST00000533961	TRBV10-2	A0A0K0K1G8	114 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961		H7BYZ3	331 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961		K7EP13	123 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	SLC22A1	O15245	554 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	CLPS	P04118	112 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	NFYB	P25208	207 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	FKBP2	P26885	142 aa	Known RBP	0.82	□□□□□ -2.28
RDX-215	ENST00000533961	AKR1C3	P42330	323 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	INSL3	P51460	131 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	UBE2B	P63146	152 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	EIF5A	P63241	154 aa	Known RBP	0.82	□□□□□ -2.28
RDX-215	ENST00000533961	SUPT4H1	P63272	117 aa	Known RBP	0.82	□□□□□ -2.28
RDX-215	ENST00000533961	CDK5R1	Q15078	307 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	FP248	Q71RG6	208 aa	Predicted RBP	0.82	□□□□□ -2.28
RDX-215	ENST00000533961	TMEM229B	Q8NBD8	167 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	OR8D4	Q8NGM9	314 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	WFDC5	Q8TCV5	224 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	C1orf54	Q8WWF1	131 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	DNAJC9	Q8WXX5	260 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	CGREF1	Q99674	301 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	HIST1H2BL	Q99880	126 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	LINC00467	Q9BRT7	94 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	OR2H1	Q9GZK4	316 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.82	□□□□□ -2.28
RDX-215	ENST00000533961	OSTC	Q9NRP0	149 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	DOCK4	Q8N1I0	1966 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	TENM3	Q9P273	2699 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	CCDC88C	Q9P219	2028 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	RIMBP3C	A6NJZ7	1639 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	RIMBP3B	A6NNM3	1639 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	RIMBP3	Q9UFD9	1639 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	OVOS2	A0A0J9YW53	1432 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	OVOS2	Q6IE36	1432 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	A2M	P01023	1474 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	BCL9L	Q86UU0	1499 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961		A0A096LPI6	279 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	IGHV1-58	A0A0C4DH39	117 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	OR51F1	A6NGY5	319 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	TMEM256-PLSCR3	K7ERE1	68 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	SULT1C4	O75897	302 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	CST7	O76096	145 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	HTR1A	P08908	422 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	METTL15P1	P0C7V9	234 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	MPC1L	P0DKB6	136 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	HLA-E	P13747	358 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	EVI2A	P22794	236 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	S100A11	P31949	105 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	RPL35	P42766	123 aa	Known RBP	0.81	□□□□□ -2.28
RDX-215	ENST00000533961	DYNLT3	P51808	116 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	CKS1B	P61024	79 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	MYL5	Q02045	173 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	MSMO1	Q15800	293 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	NNAT	Q16517	81 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	NDUFA5	Q16718	116 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	KIAA2026	Q5HYC2	2103 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961		Q5XG85	94 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	CROCCP2	Q86T23	111 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	OR8I2	Q8N0Y5	310 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	C3orf56	Q8N813	242 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	OR52R1	Q8NGF1	315 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	OR8J3	Q8NGG0	315 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	PPTC7	Q8NI37	304 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	STAG3L4	Q8TBR4	150 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	TMEM106A	Q96A25	262 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	BORCS8	Q96FH0	119 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	MCEE	Q96PE7	176 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	PFDN5	Q99471	154 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	POPDC3	Q9HBV1	291 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	OTOR	Q9NRC9	128 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	COPZ2	Q9P299	210 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	NAT8B	Q9UHF3	227 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	HSPB8	Q9UJY1	196 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	FRMPD1	Q5SYB0	1578 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	MALRD1	Q5VYJ5	2156 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	RTL9	Q8NET4	1388 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	KDM6A	O15550	1401 aa	Predicted RBP	0.81	□□□□□ -2.28
RDX-215	ENST00000533961	KIAA1107	Q9UPP5	1409 aa		0.81	□□□□□ -2.28
RDX-215	ENST00000533961	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.8	□□□□□ -2.28
RDX-215	ENST00000533961	TCOF1	Q13428	1488 aa	Known RBP	0.8	□□□□□ -2.28
RDX-215	ENST00000533961	CEP164	Q9UPV0	1460 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	COL6A6	A6NMZ7	2263 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961		A8MWV9	139 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	C1orf196	B1AJZ1	125 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961		C9JAW5	83 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	GABARAP	H6UMI1	98 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	SDCBP	O00560	298 aa	Predicted RBP	0.8	□□□□□ -2.28
RDX-215	ENST00000533961	OR2T1	O43869	369 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	HIST1H2BK	O60814	126 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	DPM2	O94777	84 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	TNFSF15	O95150	251 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	OR2H2	O95918	312 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	NCR2	O95944	276 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	IFNA4	P05014	189 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	HIST1H2BJ	P06899	126 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	TSPAN19	P0C672	248 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	CRYGA	P11844	174 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	SDC2	P34741	201 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	RAB5C	P51148	216 aa		0.8	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms