RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 AQP10Q96PS8 301 aa8.65□□□□□ -1.03
ACER3-210ENST00000531352 ARV1Q9H2C2 271 aa8.65□□□□□ -1.03
ACER3-210ENST00000531352 PXMP4Q9Y6I8 212 aa8.65□□□□□ -1.03
ACER3-210ENST00000531352 HELTA6NFD8 242 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 H3BRN7 92 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 H3BTX0 84 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 ZNF688P0C7X2 276 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 DEFB131AP59861 70 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 C1orf194Q5T5A4 169 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 OR8I2Q8N0Y5 310 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 FAM110AQ9BQ89 295 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 SLC39A9Q9NUM3 307 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 HIGD1AQ9Y241 93 aa8.64□□□□□ -1.03
ACER3-210ENST00000531352 B2MP61769 119 aa8.63□□□□□ -1.03
ACER3-210ENST00000531352 SHANK2-AS3Q9BTD1 123 aa8.63□□□□□ -1.03
ACER3-210ENST00000531352 NRN1Q9NPD7 142 aa8.63□□□□□ -1.03
ACER3-210ENST00000531352 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
ACER3-210ENST00000531352 RPL29P47914 159 aaKnown RBP8.63□□□□□ -1.03
ACER3-210ENST00000531352 RAB31Q13636 194 aa8.63□□□□□ -1.03
ACER3-210ENST00000531352 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
ACER3-210ENST00000531352 SH3BGRL3Q9H299 93 aa8.63□□□□□ -1.03
ACER3-210ENST00000531352 CXCL2P19875 107 aa8.62□□□□□ -1.03
ACER3-210ENST00000531352 FGL1Q08830 312 aa8.62□□□□□ -1.03
ACER3-210ENST00000531352 RPL7L1Q6DKI1 246 aaKnown RBP8.62□□□□□ -1.03
ACER3-210ENST00000531352 HSD17B11Q8NBQ5 300 aa8.62□□□□□ -1.03
ACER3-210ENST00000531352 PFDN2Q9UHV9 154 aa8.62□□□□□ -1.03
ACER3-210ENST00000531352 SOCS3O14543 225 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 COX7A2P2O60397 106 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
ACER3-210ENST00000531352 TM2D3Q9BRN9 247 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 SEPSECSQ9HD40 501 aaKnown RBP8.61□□□□□ -1.03
ACER3-210ENST00000531352 DNAJC4Q9NNZ3 241 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 CSMD3Q7Z407 3707 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 MRPS12O15235 138 aaKnown RBP8.61□□□□□ -1.03
ACER3-210ENST00000531352 MPDU1O75352 247 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
ACER3-210ENST00000531352 HLA-DMBP28068 263 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 Q6ZRG5 221 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 ASB13Q8WXK3 278 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 C20orf173Q96LM9 149 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 RETNQ9HD89 108 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 CYTL1Q9NRR1 136 aa8.61□□□□□ -1.03
ACER3-210ENST00000531352 LOC102724200A0A096LPH7 203 aaPredicted RBP8.6□□□□□ -1.03
ACER3-210ENST00000531352 PSMG4Q5JS54 123 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 PXDC1Q5TGL8 231 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 C10orf113Q5VZT2 155 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 MIR17HGQ75NE6 70 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 INO80EQ8NBZ0 244 aaPredicted RBP8.6□□□□□ -1.03
ACER3-210ENST00000531352 MFFQ9GZY8 342 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
ACER3-210ENST00000531352 KNCNA6PVL3 124 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 NHLRC4P0CG21 123 aaPredicted RBP8.6□□□□□ -1.03
ACER3-210ENST00000531352 RNF182Q8N6D2 247 aa8.6□□□□□ -1.03
ACER3-210ENST00000531352 TRAV8-2A0A0B4J237 113 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 F6UB75 175 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 H3BQ15 152 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 SLC17A3O00476 420 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 PYYP10082 97 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 ATP6V0CP27449 155 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 GALR1P47211 349 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 RAB2AP61019 212 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 FFAR4Q5NUL3 377 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 GDF5OSQ5U4N7 250 aa8.59□□□□□ -1.03
ACER3-210ENST00000531352 IFNA5P01569 189 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 CMC4P56277 68 aaPredicted RBP8.58□□□□□ -1.04
ACER3-210ENST00000531352 SCGB1C1Q8TD33 95 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 LINC00052Q96N35 136 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 HMGB3O15347 200 aaKnown RBP8.58□□□□□ -1.04
ACER3-210ENST00000531352 RPL7P18124 248 aaKnown RBP8.58□□□□□ -1.04
ACER3-210ENST00000531352 ACTL10Q5JWF8 245 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 FAM78BQ5VT40 261 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 FAM167A-AS1Q96KT0 104 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 GPR82Q96P67 336 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 RCHY1Q96PM5 261 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 SLC25A2Q9BXI2 301 aa8.58□□□□□ -1.04
ACER3-210ENST00000531352 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
ACER3-210ENST00000531352 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
ACER3-210ENST00000531352 SNRPD3P62318 126 aaKnown RBP8.57□□□□□ -1.04
ACER3-210ENST00000531352 SSX7Q7RTT5 188 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 TCTE3Q8IZS6 198 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 ZNF709Q8N972 641 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 OR1L4Q8NGR5 311 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 GATAD1Q8WUU5 269 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 ZNF503Q96F45 646 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 PFDN5Q99471 154 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 U3KQK5 164 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 ISLRO14498 428 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 NKX2-5P52952 324 aaPredicted RBP8.57□□□□□ -1.04
ACER3-210ENST00000531352 LGALSLQ3ZCW2 172 aaPredicted RBP8.57□□□□□ -1.04
ACER3-210ENST00000531352 AKAP14Q86UN6 197 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 KCNRGQ8N5I3 272 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 C16orf92Q96LL3 132 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 PARD6GQ9BYG4 376 aaPredicted RBP8.57□□□□□ -1.04
ACER3-210ENST00000531352 ZMAT4Q9H898 229 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 ZNF586Q9NXT0 402 aa8.57□□□□□ -1.04
ACER3-210ENST00000531352 A0A087X0K7 114 aa8.56□□□□□ -1.04
ACER3-210ENST00000531352 GIG44P09565 113 aaPredicted RBP8.56□□□□□ -1.04
ACER3-210ENST00000531352 OR10J4P0C629 311 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms