RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 KLHDC1Q8N7A1 406 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 OR2D3Q8NGH3 330 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 C8orf46Q8TAG6 207 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 LAMTOR2Q9Y2Q5 125 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 SIGLEC9Q9Y336 463 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 OVOL3O00110 214 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 IGLV1-47P01700 117 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 BTF3P20290 206 aaKnown RBP12.34□□□□□ -0.43
USP35-206ENST00000530535 ZFP30Q9Y2G7 519 aa12.34□□□□□ -0.43
USP35-206ENST00000530535 TRAV9-2A0A087WT02 112 aa12.33□□□□□ -0.44
USP35-206ENST00000530535 A8MWL6 223 aa12.33□□□□□ -0.44
USP35-206ENST00000530535 NPIPB6E9PJ23 425 aa12.33□□□□□ -0.44
USP35-206ENST00000530535 TSPOP30536 169 aa12.33□□□□□ -0.44
USP35-206ENST00000530535 Q56UQ5 140 aa12.33□□□□□ -0.44
USP35-206ENST00000530535 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.44
USP35-206ENST00000530535 C22orf15Q8WYQ4 148 aa12.33□□□□□ -0.44
USP35-206ENST00000530535 F11RQ9Y624 299 aaKnown RBP12.33□□□□□ -0.44
USP35-206ENST00000530535 SOX21Q9Y651 276 aaPredicted RBP12.33□□□□□ -0.44
USP35-206ENST00000530535 IGHV2-26A0A0B4J1V2 119 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 SH2D7A6NKC9 451 aaPredicted RBP12.32□□□□□ -0.44
USP35-206ENST00000530535 CD24P25063 80 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 PRB3Q04118 309 aaPredicted RBP12.32□□□□□ -0.44
USP35-206ENST00000530535 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 CLEC5AQ9NY25 188 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 ZNF462Q96JM2 2506 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 M0QZ24 198 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 IGLV2-11P01706 119 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 P01737 135 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 IGLC1P0CG04 106 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 HOXB4P17483 251 aaPredicted RBP12.32□□□□□ -0.44
USP35-206ENST00000530535 Q86TA4 180 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 TNFRSF14Q92956 283 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 PGLYRP4Q96LB8 373 aa12.32□□□□□ -0.44
USP35-206ENST00000530535 MRPS16Q9Y3D3 137 aaKnown RBP12.32□□□□□ -0.44
USP35-206ENST00000530535 FLNCQ14315 2725 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 IGHV1-3A0A0C4DH29 117 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 IGHV1-69-2A0A0G2JMI3 117 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 IGLL1P15814 213 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 TRAV8-1A0A0A6YYK1 113 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 C20orf202A1L168 122 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 ZNF785A8K8V0 405 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 APOHP02749 345 aaPredicted RBP12.31□□□□□ -0.44
USP35-206ENST00000530535 PSG1P11464 419 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 FOXA3P55318 350 aaPredicted RBP12.31□□□□□ -0.44
USP35-206ENST00000530535 C11orf71Q6IPW1 123 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 RBM14Q96PK6 669 aaKnown RBP12.31□□□□□ -0.44
USP35-206ENST00000530535 OTORQ9NRC9 128 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 TMEM14CQ9P0S9 112 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 HIGD1AQ9Y241 93 aa12.31□□□□□ -0.44
USP35-206ENST00000530535 I3L2K1 104 aa12.3□□□□□ -0.44
USP35-206ENST00000530535 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
USP35-206ENST00000530535 RBPMS2Q6ZRY4 209 aaKnown RBP12.3□□□□□ -0.44
USP35-206ENST00000530535 PPP1R27Q86WC6 154 aa12.3□□□□□ -0.44
USP35-206ENST00000530535 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
USP35-206ENST00000530535 C1RLQ9NZP8 487 aa12.3□□□□□ -0.44
USP35-206ENST00000530535 IGHV1-24A0A0C4DH33 117 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 FAM231BA6NCW3 169 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 BUB1B-PAK6H3BSN5 160 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 DTX2Q86UW9 622 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 CIARTQ8N365 385 aaPredicted RBP12.29□□□□□ -0.44
USP35-206ENST00000530535 OR4F17Q8NGA8 305 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 SLC25A39Q9BZJ4 359 aaPredicted RBP12.29□□□□□ -0.44
USP35-206ENST00000530535 MALRD1Q5VYJ5 2156 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 LYZP61626 148 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 LINC00173Q6ZV60 143 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 CHCHD1Q96BP2 118 aaKnown RBP12.29□□□□□ -0.44
USP35-206ENST00000530535 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
USP35-206ENST00000530535 FAM162BQ5T6X4 162 aa12.28□□□□□ -0.44
USP35-206ENST00000530535 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
USP35-206ENST00000530535 SRSF12Q8WXF0 261 aaKnown RBP12.28□□□□□ -0.44
USP35-206ENST00000530535 FBXL15Q9H469 300 aa12.28□□□□□ -0.44
USP35-206ENST00000530535 UBTD1Q9HAC8 227 aa12.28□□□□□ -0.44
USP35-206ENST00000530535 INSIG2Q9Y5U4 225 aa12.28□□□□□ -0.44
USP35-206ENST00000530535 LOC102724200A0A096LPH7 203 aaPredicted RBP12.28□□□□□ -0.44
USP35-206ENST00000530535 TRBV6-1A0A0K0K1D8 114 aa12.28□□□□□ -0.44
USP35-206ENST00000530535 IGKV1-17P01599 117 aa12.28□□□□□ -0.44
USP35-206ENST00000530535 DOPEY1Q5JWR5 2465 aa12.27□□□□□ -0.45
USP35-206ENST00000530535 LYNX1G3V0Z9 82 aa12.27□□□□□ -0.45
USP35-206ENST00000530535 LYNX1P0DP58 116 aa12.27□□□□□ -0.45
USP35-206ENST00000530535 SRSF1Q07955 248 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP35-206ENST00000530535 DAZAP1Q96EP5 407 aaKnown RBP12.27□□□□□ -0.45
USP35-206ENST00000530535 NDFIP1Q9BT67 221 aa12.27□□□□□ -0.45
USP35-206ENST00000530535 UTP20O75691 2785 aaKnown RBP12.26□□□□□ -0.45
USP35-206ENST00000530535 HAX1O00165 279 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 HINT1P49773 126 aaPredicted RBP12.26□□□□□ -0.45
USP35-206ENST00000530535 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 GOLT1AQ6ZVE7 132 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 SPOCK3Q9BQ16 436 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 SYS1-DBNDD2H3BUS1 97 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 GOSR1O95249 250 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 COL8A1P27658 744 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 PRNTQ86SH4 94 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 NEU4Q8WWR8 484 aaPredicted RBP12.26□□□□□ -0.45
USP35-206ENST00000530535 TP73-AS1Q9UF72 201 aa12.26□□□□□ -0.45
USP35-206ENST00000530535 USP9XQ93008 2570 aaPredicted RBP12.25□□□□□ -0.45
USP35-206ENST00000530535 LDLRAD2Q5SZI1 272 aa12.25□□□□□ -0.45
USP35-206ENST00000530535 ORAOV1Q8WV07 137 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms