RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 LRP1BQ9NZR2 4599 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 C5orf51A6NDU8 294 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 EMP1P54849 157 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 FXYD7P58549 80 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 CNPY1Q3B7I2 92 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 TMEM182Q6ZP80 229 aaPredicted RBP8.09□□□□□ -1.11
SF3B2-208ENST00000529994 MITD1Q8WV92 249 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 CCDC32Q9BV29 185 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 TMEM147Q9BVK8 224 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 WDR12Q9GZL7 423 aaKnown RBP8.09□□□□□ -1.11
SF3B2-208ENST00000529994 XCL2Q9UBD3 114 aa8.09□□□□□ -1.11
SF3B2-208ENST00000529994 HERC1Q15751 4861 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 FAM240BA0A1B0GVZ2 78 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 L7N2F9 121 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 CDK2AP2O75956 126 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 IL5P05113 134 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 H2AFB2P0C5Z0 115 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 ID1P41134 155 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 BCAP31P51572 246 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 PAX9P55771 341 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 VAMP2P63027 116 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 TNP2Q05952 138 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 CYP2G1PQ6ZSU1 146 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 SMIM8Q96KF7 97 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 SLC25A32Q9H2D1 315 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 MGAT4CQ9UBM8 478 aa8.08□□□□□ -1.12
SF3B2-208ENST00000529994 MBPP02686 304 aaPredicted RBP8.07□□□□□ -1.12
SF3B2-208ENST00000529994 OR5G3P0C626 314 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 HTN3P15516 51 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 GALR1P47211 349 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 S100A10P60903 97 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 FGL1Q08830 312 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 SLC38A11Q08AI6 406 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 MZT2BQ6NZ67 158 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 TMEM144Q7Z5S9 345 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 C12orf45Q8N5I9 185 aaPredicted RBP8.07□□□□□ -1.12
SF3B2-208ENST00000529994 OR10P1Q8NGE3 313 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 OR4B1Q8NGF8 309 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 ZNF431Q8TF32 576 aaPredicted RBP8.07□□□□□ -1.12
SF3B2-208ENST00000529994 S100ZQ8WXG8 99 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 C16orf92Q96LL3 132 aa8.07□□□□□ -1.12
SF3B2-208ENST00000529994 IGHV3OR16-12A0A075B7B8 117 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 ZNF98A6NK75 572 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 PMS2P5A8MQ11 134 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 F6UB75 175 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 CFDP00746 253 aaPredicted RBP8.06□□□□□ -1.12
SF3B2-208ENST00000529994 LINC00869P0C866 280 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 PSMB3P49720 205 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 RAP2BP61225 183 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 DLK1P80370 383 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 C1orf194Q5T5A4 169 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 TMEM14EPQ6UXP3 125 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 Q8N1X5 172 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 ENKURQ8TC29 256 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 RSG1Q9BU20 258 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 HIGD1AQ9Y241 93 aa8.06□□□□□ -1.12
SF3B2-208ENST00000529994 APOBP04114 4563 aaKnown RBP8.06□□□□□ -1.12
SF3B2-208ENST00000529994 C7orf66A4D0T2 115 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 H3BMM0 161 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 K7EPK0 472 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 TSC22D2O75157 780 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 SPART-AS1P0CW21 52 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 PRB4P10163 310 aaPredicted RBP8.05□□□□□ -1.12
SF3B2-208ENST00000529994 HLA-DRB4P13762 266 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 CAV2P51636 162 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
SF3B2-208ENST00000529994 ARL16Q0P5N6 197 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 IGFL4Q6B9Z1 124 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 UHRF2Q96PU4 802 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 SCRT2Q9NQ03 307 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 HLA-DRB4X5D2U9 266 aa8.05□□□□□ -1.12
SF3B2-208ENST00000529994 FAM24AA6NFZ4 105 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 H3BRN7 92 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 SOCS3O14543 225 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 HYPMO75409 117 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 CST7O76096 145 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 TAS2R30P59541 319 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 RNF212Q495C1 297 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 FOXI2Q6ZQN5 318 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 C20orf173Q96LM9 149 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 C2orf50Q96LR7 162 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 SLC25A39Q9BZJ4 359 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-208ENST00000529994 ARL6Q9H0F7 186 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 SAV1Q9H4B6 383 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-208ENST00000529994 NPVFQ9HCQ7 196 aa8.04□□□□□ -1.12
SF3B2-208ENST00000529994 SEPSECSQ9HD40 501 aaKnown RBP8.04□□□□□ -1.12
SF3B2-208ENST00000529994 A6NHS1 94 aa8.03□□□□□ -1.12
SF3B2-208ENST00000529994 ISLRO14498 428 aa8.03□□□□□ -1.12
SF3B2-208ENST00000529994 GOSR2O14653 212 aa8.03□□□□□ -1.12
SF3B2-208ENST00000529994 UPK1BO75841 260 aa8.03□□□□□ -1.12
SF3B2-208ENST00000529994 SNRPCP09234 159 aaKnown RBP8.03□□□□□ -1.12
SF3B2-208ENST00000529994 PVALBP20472 110 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-208ENST00000529994 S100A7P31151 101 aa8.03□□□□□ -1.12
SF3B2-208ENST00000529994 MEOX2P50222 304 aa8.03□□□□□ -1.12
SF3B2-208ENST00000529994 ASAH1Q13510 395 aa8.03□□□□□ -1.12
SF3B2-208ENST00000529994 FAM78BQ5VT40 261 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms