RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 HLA-DQA1P01909 254 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 HLA-DRB1P01911 266 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 HTR1DP28221 377 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 CD1BP29016 333 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 EBLN2Q6P2I7 272 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 VSTM2AQ8TAG5 236 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 C1orf159Q96HA4 380 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 DPM3Q9P2X0 92 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 HILPDAQ9Y5L2 63 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 CHD6Q8TD26 2715 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 CELSR2Q9HCU4 2923 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 TIMM23O14925 209 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 CRYGBP07316 175 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 HOXB4P17483 251 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 CHRDL1Q9BU40 450 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 NPCDR1Q9BY65 106 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 COMMD5Q9GZQ3 224 aa13.32□□□□□ -0.28
CAPRIN1-207ENST00000529307 K7EN84 100 aa13.31□□□□□ -0.28
CAPRIN1-207ENST00000529307 VMA21Q3ZAQ7 101 aa13.31□□□□□ -0.28
CAPRIN1-207ENST00000529307 MRPL54Q6P161 138 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-207ENST00000529307 OR1L8Q8NGR8 309 aa13.31□□□□□ -0.28
CAPRIN1-207ENST00000529307 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
CAPRIN1-207ENST00000529307 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 AZU1P20160 251 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 GATA2P23769 480 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 PSG5Q15238 335 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 TREML4Q6UXN2 200 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 DYNAPQ8N1N2 210 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 SIGMAR1Q99720 223 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 V9GYV3 84 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 ABCA2Q9BZC7 2435 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 C7orf71A4D174 169 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 CFHR4Q92496 578 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 MAP1AP78559 2803 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 CSMD1Q96PZ7 3565 aa13.3□□□□□ -0.28
CAPRIN1-207ENST00000529307 IGHV4-61A0A0C4DH41 118 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 SCO2A0A1W2PP80 73 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 C9JCJ5 164 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 HSBP1O75506 76 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 AMY1AP04745 511 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 RNASE2P10153 161 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 CRYBB3P26998 211 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 ATP5J2P56134 94 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 WT1-ASQ06250 92 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 TEX45Q8NA69 505 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 C10orf105Q8TEF2 133 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 FAM168AQ92567 244 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 NPVFQ9HCQ7 196 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 C1RLQ9NZP8 487 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 CENPEQ02224 2701 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 M0R2Z0 102 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 CD24P25063 80 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 TP73-AS1Q9UF72 201 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 SIGLEC9Q9Y336 463 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 NAV3Q8IVL0 2385 aa13.29□□□□□ -0.28
CAPRIN1-207ENST00000529307 FAM231BA6NCW3 169 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 VWC2LB2RUY7 222 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 CEACAM3P40198 252 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 TNXAQ16473 311 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 KMT2BQ9UMN6 2715 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 OR4C46A6NHA9 309 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 INS-IGF2F8WCM5 200 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 OR10J4P0C629 311 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 SEC11AP67812 179 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 MGST2Q99735 147 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 PIMREGQ9BSJ6 248 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 TMEM70Q9BUB7 260 aa13.28□□□□□ -0.28
CAPRIN1-207ENST00000529307 IGHV4-30-2A0A087WSY4 118 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 K7EP34 96 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 APCSP02743 223 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 DEFA4P12838 97 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 COX6B1P14854 86 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 SSBP2P81877 361 aaPredicted RBP13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 MLANAQ16655 118 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 PERPQ96FX8 193 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 FBXL15Q9H469 300 aa13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 LSM4Q9Y4Z0 139 aaKnown RBP13.27□□□□□ -0.28
CAPRIN1-207ENST00000529307 CRXO43186 299 aaPredicted RBP13.27□□□□□ -0.29
CAPRIN1-207ENST00000529307 RAB9AP51151 201 aa13.27□□□□□ -0.29
CAPRIN1-207ENST00000529307 EAF1Q96JC9 268 aaPredicted RBP13.27□□□□□ -0.29
CAPRIN1-207ENST00000529307 AP1S3Q96PC3 154 aa13.27□□□□□ -0.29
CAPRIN1-207ENST00000529307 FNDC4Q9H6D8 234 aaPredicted RBP13.27□□□□□ -0.29
CAPRIN1-207ENST00000529307 USP9YO00507 2555 aaPredicted RBP13.26□□□□□ -0.29
CAPRIN1-207ENST00000529307 FOXH1O75593 365 aa13.26□□□□□ -0.29
CAPRIN1-207ENST00000529307 SPATA12Q7Z6I5 190 aa13.26□□□□□ -0.29
CAPRIN1-207ENST00000529307 AJUBAQ96IF1 538 aa13.26□□□□□ -0.29
CAPRIN1-207ENST00000529307 SSBP4Q9BWG4 385 aaPredicted RBP13.26□□□□□ -0.29
CAPRIN1-207ENST00000529307 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
CAPRIN1-207ENST00000529307 POLQO75417 2590 aa13.26□□□□□ -0.29
CAPRIN1-207ENST00000529307 A0A1W2PPV4 95 aa13.25□□□□□ -0.29
CAPRIN1-207ENST00000529307 C9orf118A6NHY6 69 aa13.25□□□□□ -0.29
CAPRIN1-207ENST00000529307 SPINK4O60575 86 aa13.25□□□□□ -0.29
CAPRIN1-207ENST00000529307 COL8A1P27658 744 aa13.25□□□□□ -0.29
CAPRIN1-207ENST00000529307 PLP1P60201 277 aa13.25□□□□□ -0.29
CAPRIN1-207ENST00000529307 SMAGPQ0VAQ4 97 aa13.25□□□□□ -0.29
CAPRIN1-207ENST00000529307 GCSAMLQ5JQS6 135 aa13.25□□□□□ -0.29
CAPRIN1-207ENST00000529307 PPP1R27Q86WC6 154 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms