RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TENM2Q9NT68 2774 aa12.77□□□□□ -0.36
NR1H3-228ENST00000525441 RPL7P18124 248 aaKnown RBP12.77□□□□□ -0.37
NR1H3-228ENST00000525441 CXCL3P19876 107 aa12.77□□□□□ -0.37
NR1H3-228ENST00000525441 H2BFSP57053 126 aa12.77□□□□□ -0.37
NR1H3-228ENST00000525441 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
NR1H3-228ENST00000525441 IL15RAQ13261 267 aa12.77□□□□□ -0.37
NR1H3-228ENST00000525441 RAB31Q13636 194 aa12.77□□□□□ -0.37
NR1H3-228ENST00000525441 RAB32Q13637 225 aa12.77□□□□□ -0.37
NR1H3-228ENST00000525441 SCRT1Q9BWW7 348 aa12.77□□□□□ -0.37
NR1H3-228ENST00000525441 SAV1Q9H4B6 383 aaPredicted RBP12.77□□□□□ -0.37
NR1H3-228ENST00000525441 C11orf1Q9H5F2 150 aa12.77□□□□□ -0.37
NR1H3-228ENST00000525441 DYNC2H1Q8NCM8 4307 aaKnown RBP12.77□□□□□ -0.37
NR1H3-228ENST00000525441 STARD9Q9P2P6 4700 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 A0A1B0GVG6 124 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 FAM24AA6NFZ4 105 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 AGPAT2O15120 278 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 CST7O76096 145 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 SIX6O95475 246 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 EBLN2Q6P2I7 272 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 STX12Q86Y82 276 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 CHAC2Q8WUX2 184 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 NMES1Q9C002 83 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 MFFQ9GZY8 342 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 ARL6Q9H0F7 186 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 RPRMQ9NS64 109 aa12.76□□□□□ -0.37
NR1H3-228ENST00000525441 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
NR1H3-228ENST00000525441 MIFP14174 115 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 S100A11P31949 105 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 SULT1A1P50225 295 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 HBG1P69891 147 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 HBG2P69892 147 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 CYCSP99999 105 aaKnown RBP12.75□□□□□ -0.37
NR1H3-228ENST00000525441 ASB13Q8WXK3 278 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 CLUHP3Q96NS8 147 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 UQCC1Q9NVA1 299 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
NR1H3-228ENST00000525441 CSMD3Q7Z407 3707 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 ZNF705EA8MWA4 302 aaPredicted RBP12.74□□□□□ -0.37
NR1H3-228ENST00000525441 RLN2P04090 185 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 CEMP1Q6PRD7 247 aaPredicted RBP12.74□□□□□ -0.37
NR1H3-228ENST00000525441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 TMEM252Q8N6L7 170 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 CSNK1G2-AS1Q8NCQ2 148 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 C11orf45Q8TAV5 145 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 KLK5Q9Y337 293 aaPredicted RBP12.74□□□□□ -0.37
NR1H3-228ENST00000525441 RYR3Q15413 4870 aa12.74□□□□□ -0.37
NR1H3-228ENST00000525441 hCG_2014768A0A024R1R8 64 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 COX7A2P2O60397 106 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 GIPP09681 153 aaPredicted RBP12.73□□□□□ -0.37
NR1H3-228ENST00000525441 CAMLGP49069 296 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 FGL1Q08830 312 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 GDF5OSQ5U4N7 250 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 Q8NAQ8 132 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 OR4B1Q8NGF8 309 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 MGST2Q99735 147 aa12.73□□□□□ -0.37
NR1H3-228ENST00000525441 ELOA3CA0A087WX78 387 aaPredicted RBP12.72□□□□□ -0.37
NR1H3-228ENST00000525441 IGHV4-28A0A0C4DH34 117 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 IGSF23A1L1A6 192 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 DEFB4AO15263 64 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 IGKV3-20P01619 116 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 DEFB1P60022 68 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 ATP6V1FQ16864 119 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 VWC2Q2TAL6 325 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 PATE2Q6UY27 113 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 Q6ZRG5 221 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 C20orf173Q96LM9 149 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 C17orf77Q96MU5 243 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 X6R8D5 127 aa12.72□□□□□ -0.37
NR1H3-228ENST00000525441 A0A087X0K7 114 aa12.71□□□□□ -0.37
NR1H3-228ENST00000525441 A0A0J9YX75 114 aa12.71□□□□□ -0.37
NR1H3-228ENST00000525441 PSG9Q00887 426 aa12.71□□□□□ -0.37
NR1H3-228ENST00000525441 LINC00305Q7Z4B0 112 aa12.71□□□□□ -0.37
NR1H3-228ENST00000525441 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.37
NR1H3-228ENST00000525441 SLC25A31Q9H0C2 315 aa12.71□□□□□ -0.37
NR1H3-228ENST00000525441 UBE2L5PA0A1B0GUS4 154 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 E5RGE8 158 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 F6UB75 175 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 DUSP14O95147 198 aaKnown RBP12.7□□□□□ -0.38
NR1H3-228ENST00000525441 NANOS2P60321 138 aaKnown RBP12.7□□□□□ -0.38
NR1H3-228ENST00000525441 BAXQ07812 192 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 FAM78BQ5VT40 261 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 C10orf113Q5VZT2 155 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 LRRC20Q8TCA0 184 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
NR1H3-228ENST00000525441 RBMY1A1P0DJD3 496 aaKnown RBP12.69□□□□□ -0.38
NR1H3-228ENST00000525441 RBMY1CP0DJD4 496 aa12.69□□□□□ -0.38
NR1H3-228ENST00000525441 FXYD7P58549 80 aa12.69□□□□□ -0.38
NR1H3-228ENST00000525441 RBMY1FQ15415 496 aaKnown RBP12.69□□□□□ -0.38
NR1H3-228ENST00000525441 LRRC37A5PQ49AS3 106 aa12.69□□□□□ -0.38
NR1H3-228ENST00000525441 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
NR1H3-228ENST00000525441 OR1L4Q8NGR5 311 aa12.69□□□□□ -0.38
NR1H3-228ENST00000525441 PFDN5Q99471 154 aa12.69□□□□□ -0.38
NR1H3-228ENST00000525441 DNAJC4Q9NNZ3 241 aa12.69□□□□□ -0.38
NR1H3-228ENST00000525441 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 MPDU1O75352 247 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms