RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 RSG1Q9BU20 258 aa9.5□□□□□ -0.89
VEGFA-224ENST00000523873 RETNQ9HD89 108 aa9.5□□□□□ -0.89
VEGFA-224ENST00000523873 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
VEGFA-224ENST00000523873 TRAV5A0A0B4J249 113 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 KNCNA6PVL3 124 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 SOCS3O14543 225 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 MPDU1O75352 247 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 DEFB1P60022 68 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 PXDC1Q5TGL8 231 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 Q6ZNX1 250 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 Q6ZRG5 221 aa9.49□□□□□ -0.89
VEGFA-224ENST00000523873 HUWE1Q7Z6Z7 4374 aaKnown RBP9.49□□□□□ -0.89
VEGFA-224ENST00000523873 hCG_2014768A0A024R1R8 64 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 LOC102724200A0A096LPH7 203 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-224ENST00000523873 RNF222A6NCQ9 220 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 MRPS12O15235 138 aaKnown RBP9.48□□□□□ -0.89
VEGFA-224ENST00000523873 IFNA5P01569 189 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 GALR1P47211 349 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 CMC4P56277 68 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-224ENST00000523873 SPATA31B1PQ5VZV4 182 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 IGFL4Q6B9Z1 124 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 LINC00052Q96N35 136 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 DNAJC4Q9NNZ3 241 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 TNFSF18Q9UNG2 199 aa9.48□□□□□ -0.89
VEGFA-224ENST00000523873 H3BTX0 84 aa9.47□□□□□ -0.89
VEGFA-224ENST00000523873 ARPC5O15511 151 aa9.47□□□□□ -0.89
VEGFA-224ENST00000523873 PRB4P10163 310 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-224ENST00000523873 ATF4P18848 351 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-224ENST00000523873 S100A7P31151 101 aa9.47□□□□□ -0.89
VEGFA-224ENST00000523873 ZNF709Q8N972 641 aa9.47□□□□□ -0.89
VEGFA-224ENST00000523873 OR1L4Q8NGR5 311 aa9.47□□□□□ -0.89
VEGFA-224ENST00000523873 SCGB1C1Q8TD33 95 aa9.47□□□□□ -0.89
VEGFA-224ENST00000523873 C20orf173Q96LM9 149 aa9.47□□□□□ -0.89
VEGFA-224ENST00000523873 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
VEGFA-224ENST00000523873 C17orf112F2Z3M2 114 aa9.46□□□□□ -0.9
VEGFA-224ENST00000523873 RPL7P18124 248 aaKnown RBP9.46□□□□□ -0.9
VEGFA-224ENST00000523873 FFAR4Q5NUL3 377 aa9.46□□□□□ -0.9
VEGFA-224ENST00000523873 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
VEGFA-224ENST00000523873 C16orf92Q96LL3 132 aa9.46□□□□□ -0.9
VEGFA-224ENST00000523873 GPR82Q96P67 336 aa9.46□□□□□ -0.9
VEGFA-224ENST00000523873 PFDN5Q99471 154 aa9.46□□□□□ -0.9
VEGFA-224ENST00000523873 TM2D3Q9BRN9 247 aa9.46□□□□□ -0.9
VEGFA-224ENST00000523873 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 EIF3GO75821 320 aaKnown RBP eCLIP9.45□□□□□ -0.9
VEGFA-224ENST00000523873 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-224ENST00000523873 HLA-DMBP28068 263 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 MIR17HGQ75NE6 70 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 HSD17B11Q8NBQ5 300 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 OR11H4Q8NGC9 324 aa9.45□□□□□ -0.9
VEGFA-224ENST00000523873 A0A087X0K7 114 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 F6UB75 175 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 ID1P41134 155 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 PSMB3P49720 205 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
VEGFA-224ENST00000523873 RPL7L1Q6DKI1 246 aaKnown RBP9.44□□□□□ -0.9
VEGFA-224ENST00000523873 S100A7AQ86SG5 101 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 STHQ8IWL8 128 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 GATAD1Q8WUU5 269 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 ST6GAL2Q96JF0 529 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 RCHY1Q96PM5 261 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 SLC25A2Q9BXI2 301 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-224ENST00000523873 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
VEGFA-224ENST00000523873 KCNIP2Q9NS61 270 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 U3KQK5 164 aa9.44□□□□□ -0.9
VEGFA-224ENST00000523873 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 H3BQ15 152 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 ISLRO14498 428 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 PYYP10082 97 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 MEOX2P50222 304 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 TRPT1Q86TN4 253 aaKnown RBP9.43□□□□□ -0.9
VEGFA-224ENST00000523873 BPIFA4PQ86YQ2 179 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 SPATA25Q9BR10 227 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 MFFQ9GZY8 342 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 SH3BGRL3Q9H299 93 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 ZMAT4Q9H898 229 aa9.43□□□□□ -0.9
VEGFA-224ENST00000523873 SLC17A3O00476 420 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 IGKV3-20P01619 116 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 IGLC2P0DOY2 106 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 ATP6V0CP27449 155 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 APOC4P55056 127 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 RAB2AP61019 212 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 ZNF266Q14584 549 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 FAM167A-AS1Q96KT0 104 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 ZNF586Q9NXT0 402 aa9.42□□□□□ -0.9
VEGFA-224ENST00000523873 ZNF705DP0CH99 300 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-224ENST00000523873 ZNF705BP0CI00 300 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-224ENST00000523873 CXCL2P19875 107 aa9.41□□□□□ -0.9
VEGFA-224ENST00000523873 C4BPBP20851 252 aa9.41□□□□□ -0.9
VEGFA-224ENST00000523873 LRRC20Q8TCA0 184 aa9.41□□□□□ -0.9
VEGFA-224ENST00000523873 MRPL32Q9BYC8 188 aaKnown RBP9.41□□□□□ -0.9
VEGFA-224ENST00000523873 CSTL1Q9H114 145 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms