RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 YIPF3Q9GZM5 350 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 POPDC3Q9HBV1 291 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 TAS2R4Q9NYW5 299 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 TOP2BQ02880 1626 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 NBEAL1Q6ZS30 2694 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 RTEL1-TNFRSF6BF6WH68 1400 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 PIK3C2AO00443 1686 aa1.9□□□□□ -2.1
SQLE-204ENST00000520493 IBA57-AS1B1ANH7 110 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 PMP2P02689 132 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 HLA-EP13747 358 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 AQP4P55087 323 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 DYNLT1P63172 113 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 TPRXLQ17RH7 258 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 ZNF181Q2M3W8 571 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 PHF5AQ7RTV0 110 aaKnown RBP1.9□□□□□ -2.11
SQLE-204ENST00000520493 BORCS8Q96FH0 119 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 CARD19Q96LW7 228 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 ADAT1Q9BUB4 502 aaKnown RBP1.9□□□□□ -2.11
SQLE-204ENST00000520493 TIMM21Q9BVV7 248 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 C6orf62Q9GZU0 229 aaPredicted RBP1.9□□□□□ -2.11
SQLE-204ENST00000520493 MED31Q9Y3C7 131 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 LHFPL6Q9Y693 200 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 GOLGB1Q14789 3259 aaKnown RBP1.9□□□□□ -2.11
SQLE-204ENST00000520493 TRPM1Q7Z4N2 1603 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 MUC3AQ02505 3323 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 TENM4Q6N022 2769 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 BCL9O00512 1426 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 POLQO75417 2590 aa1.9□□□□□ -2.11
SQLE-204ENST00000520493 FBN1P35555 2871 aaKnown RBP1.89□□□□□ -2.11
SQLE-204ENST00000520493 NUP98P52948 1817 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 MPDZO75970 2070 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 CCDC180Q9P1Z9 1646 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 NUP210Q8TEM1 1887 aaPredicted RBP1.89□□□□□ -2.11
SQLE-204ENST00000520493 CST7O76096 145 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 OR10J4P0C629 311 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 BAALC-AS2P0C853 105 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 RHOGP84095 191 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 EIF3IQ13347 325 aaKnown RBP1.89□□□□□ -2.11
SQLE-204ENST00000520493 BRMS1LQ5PSV4 323 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 EIF5AL1Q6IS14 154 aaKnown RBP1.89□□□□□ -2.11
SQLE-204ENST00000520493 LRRC28Q86X40 367 aaPredicted RBP1.89□□□□□ -2.11
SQLE-204ENST00000520493 ST6GALNAC3Q8NDV1 305 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 SLC30A7Q8NEW0 376 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 SLC25A21Q9BQT8 299 aaPredicted RBP1.89□□□□□ -2.11
SQLE-204ENST00000520493 NPCDR1Q9BY65 106 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 OR2H1Q9GZK4 316 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 BCL2L10Q9HD36 194 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 JPT1Q9UK76 154 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 HS3ST2Q9Y278 367 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 FLNAP21333 2647 aaKnown RBP1.89□□□□□ -2.11
SQLE-204ENST00000520493 TEX15Q9BXT5 2789 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 RYR3Q15413 4870 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 TRAPPC8Q9Y2L5 1435 aa1.89□□□□□ -2.11
SQLE-204ENST00000520493 ZDBF2Q9HCK1 2354 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 DISP1Q96F81 1524 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 MEIKINA0A087WXM9 373 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 A0A1B0GX51 115 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 A8MWV9 139 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 H3BRN7 92 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 H7BYZ3 331 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 C1QCP02747 245 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 MIFP14174 115 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 RPL7P18124 248 aaKnown RBP1.88□□□□□ -2.11
SQLE-204ENST00000520493 FKBP2P26885 142 aaKnown RBP1.88□□□□□ -2.11
SQLE-204ENST00000520493 S100A11P31949 105 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 PSG9Q00887 426 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 SLC38A11Q08AI6 406 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 SOSTDC1Q6X4U4 206 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 C9orf163Q8N9P6 203 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 OTORQ9NRC9 128 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 CEP152O94986 1710 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 PLXNA3P51805 1871 aa1.88□□□□□ -2.11
SQLE-204ENST00000520493 NCKAP5O14513 1909 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 ADGRB3O60242 1522 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 TENM1Q9UKZ4 2725 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 IGKV1D-42A0A075B6H8 117 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 A0A087WX48 190 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 BORCS7-ASMTA0A0B4J1R7 106 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 J3KT08 172 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 OVOL1O14753 267 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 HIST1H2BKO60814 126 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 DHFRP00374 187 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 IFNA4P05014 189 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 HIST1H2BJP06899 126 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 CXCL1P09341 107 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 RPS3P23396 243 aaKnown RBP eCLIP1.87□□□□□ -2.114e-13■□□□□ 11.2
SQLE-204ENST00000520493 TMBIM6P55061 237 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 ARPP19P56211 112 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 HES1Q14469 280 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 SMCO1Q147U7 214 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 ESRGQ1W209 222 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 LINC00471Q8N535 108 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 MAFIPQ8WZ33 124 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 TTTY12Q9BZ98 90 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 TCEAL2Q9H3H9 227 aaPredicted RBP1.87□□□□□ -2.11
SQLE-204ENST00000520493 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 NAT8BQ9UHF3 227 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 RNF11Q9Y3C5 154 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 ZFHX2Q9C0A1 2572 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms