RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SEC11BP0C7V7 166 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 C8orf88P0DMB2 117 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 HLA-DMAP28067 261 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 CDC34P49427 236 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 BLVRAP53004 296 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 CMC4P56277 68 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 HOXC5Q00444 222 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 ENDOGQ14249 297 aaKnown RBP2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 C10orf128Q5T292 105 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 NEGR1Q7Z3B1 354 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 GATD1Q8NB37 220 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNRF2Q8NHG8 242 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 RNF133Q8WVZ7 376 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 PACRGQ96M98 296 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 CHST5Q9GZS9 411 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 SND1-IT1Q9HBX3 110 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 POLR1DQ9Y2S0 133 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 S4R3C0 116 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 IGKV1D-43A0A0B4J1Z2 117 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 A0A1B0GW64 132 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 OOSP1A8MZH6 123 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 NRASP01111 189 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 HRASP01112 189 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 KRASP01116 189 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 IGLV7-43P04211 117 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 DBIP07108 87 aaKnown RBP2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 GTF2F2P13984 249 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 M6PRP20645 277 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 INPP1P49441 399 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 EDDM3AQ14507 147 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 HIST3H3Q16695 136 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 HLA-DRB5Q30154 266 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 DEFB114Q30KQ6 69 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 C12orf74Q32Q52 190 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 LIN52Q52LA3 116 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 LPCAT4Q643R3 524 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNF660Q6AZW8 331 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 C4orf33Q8N1A6 199 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 CYGBQ8WWM9 190 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 PYURFQ96I23 114 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 LINC01587Q99440 93 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 TMEM208Q9BTX3 173 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 FAM206AQ9NX38 181 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 RBM12B-AS1Q9P1G2 102 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 ERGIC3Q9Y282 383 aa2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 V9GYY5 206 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P23-201ENST00000518743 IGKV1D-42A0A075B6H8 117 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 hADV38S2A0JD32 116 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 RFPL4AA6NLU0 287 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 RFPL4AL1F8VTS6 287 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 MFNGO00587 321 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 ADAP1O75689 374 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 PIAS1O75925 651 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 CDRT1O95170 752 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 WISP3O95389 354 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 TRGV3P03979 118 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR5AC1P0C628 307 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 PSKH1P11801 424 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 PSMD7P51665 324 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 CEBPGP53567 150 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 CCL18P55774 89 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 EIF4EBP1Q13541 118 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 EBI3Q14213 229 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 SCGB1D4Q6XE38 83 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZCCHC23Q6ZST2 131 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 TCF23Q7RTU1 214 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 Q8NAQ8 132 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR2T10Q8NGZ9 312 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 TAMM41Q96BW9 452 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 ARL6Q9H0F7 186 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 AMMECR1Q9Y4X0 333 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 TIMM22Q9Y584 194 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 TRAPPC1Q9Y5R8 145 aa2.79□□□□□ -1.96
HMGB1P23-201ENST00000518743 M0R036 132 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 RER1O15258 196 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 BIRC5O15392 142 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 SMIM24O75264 130 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 MP68P56378 58 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 LINC00315P59091 139 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 RPL37AP61513 92 aaKnown RBP2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 NCALDP61601 193 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 MMDQ15546 238 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 SMIM21Q3B7S5 101 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 DCXRQ7Z4W1 244 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 NATD1Q8N6N6 113 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 TCTEX1D1Q8N7M0 179 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR51H1Q8NH63 302 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 GALMQ96C23 342 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 RTL8AQ9BWD3 113 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 EIF5A2Q9GZV4 153 aaKnown RBP2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNF286AQ9HBT8 521 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 CYTL1Q9NRR1 136 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNF586Q9NXT0 402 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNF706Q9Y5V0 76 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
HMGB1P23-201ENST00000518743 DNAH8Q96JB1 4490 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 IGHV3-21A0A0B4J1V1 117 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 IGHV3-43A0A0B4J1X8 118 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms