RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 BANF1O75531 89 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 NDUFC2O95298 119 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 C1orf137Q5JT78 98 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 DCUN1D2Q6PH85 259 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 NUP35Q8NFH5 326 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 OBSCN-AS1Q96MR7 158 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 IMUPQ9GZP8 106 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 FRMPD1Q5SYB0 1578 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 XIRP1Q702N8 1843 aaKnown RBP0.98□□□□□ -2.25
SQLE-202ENST00000518604 FHAD1B1AJZ9 1412 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 RP1P56715 2156 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 NUP98P52948 1817 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 TNRC6BQ9UPQ9 1833 aaKnown RBP0.97□□□□□ -2.25
SQLE-202ENST00000518604 TRBV6-8A0A0A6YYG3 113 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 DUXBA0A1W2PPF3 345 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 INE1O15225 51 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 TRGC2P03986 189 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 RPL7P18124 248 aaKnown RBP0.97□□□□□ -2.25
SQLE-202ENST00000518604 RPS3P23396 243 aaKnown RBP eCLIP0.97□□□□□ -2.25
SQLE-202ENST00000518604 TMEM128Q5BJH2 165 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 BRMS1LQ5PSV4 323 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 GDF5OSQ5U4N7 250 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 HRCT1Q6UXD1 115 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 TOMM20LQ6UXN7 152 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 OR8D4Q8NGM9 314 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 THEM6Q8WUY1 208 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 TEX37Q96LM6 180 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 PBDC1Q9BVG4 233 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 OR2J1Q9GZK6 312 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 C14orf132Q9NPU4 83 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 ZFP30Q9Y2G7 519 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 RNF11Q9Y3C5 154 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 N4BP2Q86UW6 1770 aaPredicted RBP0.97□□□□□ -2.25
SQLE-202ENST00000518604 CEP164Q9UPV0 1460 aa0.97□□□□□ -2.25
SQLE-202ENST00000518604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.96□□□□□ -2.26
SQLE-202ENST00000518604 TRDV1A0A1B0GX56 115 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 B4DSR2 109 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 AIPO00170 330 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 ARPC5O15511 151 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 CXCL1P09341 107 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 POLR2HP52434 150 aaKnown RBP0.96□□□□□ -2.26
SQLE-202ENST00000518604 ESRGQ1W209 222 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 LYRM7Q5U5X0 104 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 FKBP1CQ5VVH2 108 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 PATE2Q6UY27 113 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 SOSTDC1Q6X4U4 206 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 MED12LQ86YW9 2145 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 PRR15Q8IV56 129 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 Q8IYB0 196 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 FAM24BQ8N5W8 94 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 OR2T10Q8NGZ9 312 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 GRPEL2Q8TAA5 225 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 PYDC1Q8WXC3 89 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 MALSU1Q96EH3 234 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 GPER1Q99527 375 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 EFCAB11Q9BUY7 163 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 RTL8AQ9BWD3 113 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 TAF9BQ9HBM6 251 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 OTORQ9NRC9 128 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 TAS2R7Q9NYW3 318 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 GINS2Q9Y248 185 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 CAMSAP2Q08AD1 1489 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 SCN8AQ9UQD0 1980 aa0.96□□□□□ -2.26
SQLE-202ENST00000518604 CEP152O94986 1710 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 NISCHQ9Y2I1 1504 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 ANKRD31Q8N7Z5 1873 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 NCAPD3P42695 1498 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 ODAMA1E959 279 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 TLCD2A6NGC4 264 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 TSTD3H0UI37 97 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 OGNP20774 298 aaKnown RBP0.95□□□□□ -2.26
SQLE-202ENST00000518604 NFYBP25208 207 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 DYNLT3P51808 116 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 UBE2BP63146 152 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 DYNLT1P63172 113 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 MSMO1Q15800 293 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 SCGB2B2Q4G0G5 96 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 C1orf140Q5VVS0 124 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 Q5XG85 94 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 C22orf39Q6P5X5 142 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 PDZD9Q8IXQ8 264 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 LINC00301Q8NCQ3 95 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 CANT1Q8WVQ1 401 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 CCDC115Q96NT0 180 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 JPT1Q9UK76 154 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 CPDO75976 1380 aa0.95□□□□□ -2.26
SQLE-202ENST00000518604 NUP210Q8TEM1 1887 aaPredicted RBP0.95□□□□□ -2.26
SQLE-202ENST00000518604 PIK3C2AO00443 1686 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 GABARAPH6UMI1 98 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 K7ERJ3 54 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 KPNA4O00629 521 aaPredicted RBP0.94□□□□□ -2.26
SQLE-202ENST00000518604 CST8O60676 142 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 IGLV1-51P01701 117 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 SCGB1A1P11684 91 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 S100GP29377 79 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 ARPP19P56211 112 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 ARPC4P59998 168 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 CNBPP62633 177 aaKnown RBP0.94□□□□□ -2.26
SQLE-202ENST00000518604 EIF5AP63241 154 aaKnown RBP0.94□□□□□ -2.26
SQLE-202ENST00000518604 RTL8BQ17RB0 113 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms