RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 AKR1C4P17516 323 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 S100A7P31151 101 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 KRTAP10-2P60368 255 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 TMEM256Q8N2U0 113 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 RNF182Q8N6D2 247 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 OR51S1Q8NGJ8 323 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 C16orf74Q96GX8 76 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 KRTAP1-5Q9BYS1 174 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 SLC25A39Q9BZJ4 359 aaPredicted RBP10.96□□□□□ -0.65
LMNA-223ENST00000515459 Q9H3A6 140 aa10.96□□□□□ -0.65
LMNA-223ENST00000515459 TIMM8BQ9Y5J9 83 aaPredicted RBP10.96□□□□□ -0.65
LMNA-223ENST00000515459 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
LMNA-223ENST00000515459 TRAV8-2A0A0B4J237 113 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 HTN1P15515 57 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 ORM2P19652 201 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
LMNA-223ENST00000515459 TAS2R60P59551 318 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 FGL1Q08830 312 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 CLVS1Q8IUQ0 354 aaPredicted RBP10.95□□□□□ -0.66
LMNA-223ENST00000515459 BPIFCQ8NFQ6 507 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 SMIM4Q8WVI0 70 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 SCGB3A2Q96PL1 93 aa10.95□□□□□ -0.66
LMNA-223ENST00000515459 PAIP2BQ9ULR5 123 aaKnown RBP10.95□□□□□ -0.66
LMNA-223ENST00000515459 EPM2AB3EWF7 344 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 IAPPP10997 89 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 SRPXP78539 464 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 OR5I1Q13606 314 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 ZNF738Q8NE65 137 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 GNPNAT1Q96EK6 184 aaPredicted RBP10.94□□□□□ -0.66
LMNA-223ENST00000515459 TMEM147Q9BVK8 224 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 MIXL1Q9H2W2 232 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 PPP1R14DQ9NXH3 145 aa10.94□□□□□ -0.66
LMNA-223ENST00000515459 PIGBOS1A0A0B4J2F0 54 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 A0A1W2PPQ1 181 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 RGS5O15539 181 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 ANXA3P12429 323 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 GATA2P23769 480 aaPredicted RBP10.93□□□□□ -0.66
LMNA-223ENST00000515459 RHOBP62745 196 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 HIST1H1AQ02539 215 aaPredicted RBP10.93□□□□□ -0.66
LMNA-223ENST00000515459 CTF1Q16619 201 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 ZNF493Q6ZR52 646 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 OR10J6PQ8NGY7 276 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 UHRF2Q96PU4 802 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 UPK3BQ9BT76 320 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 NOP10Q9NPE3 64 aaKnown RBP10.93□□□□□ -0.66
LMNA-223ENST00000515459 SCP2D1Q9UJQ7 156 aa10.93□□□□□ -0.66
LMNA-223ENST00000515459 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
LMNA-223ENST00000515459 PITX3O75364 302 aa10.92□□□□□ -0.66
LMNA-223ENST00000515459 M6PRP20645 277 aa10.92□□□□□ -0.66
LMNA-223ENST00000515459 OR8A1Q8NGG7 326 aa10.92□□□□□ -0.66
LMNA-223ENST00000515459 RXFP4Q8TDU9 374 aa10.92□□□□□ -0.66
LMNA-223ENST00000515459 NAA50Q9GZZ1 169 aaKnown RBP10.92□□□□□ -0.66
LMNA-223ENST00000515459 DNAH5Q8TE73 4624 aa10.91□□□□□ -0.66
LMNA-223ENST00000515459 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
LMNA-223ENST00000515459 RPP30P78346 268 aaKnown RBP10.91□□□□□ -0.66
LMNA-223ENST00000515459 DLK1P80370 383 aa10.91□□□□□ -0.66
LMNA-223ENST00000515459 TMEM182Q6ZP80 229 aaPredicted RBP10.91□□□□□ -0.66
LMNA-223ENST00000515459 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
LMNA-223ENST00000515459 TMEM263Q8WUH6 116 aaKnown RBP10.91□□□□□ -0.66
LMNA-223ENST00000515459 A0A0J9YY99 117 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 DUXBA0A1W2PPF3 345 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 ANKRD20A5PA0PJZ0 165 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 H3BRN7 92 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 CTDSP2O14595 271 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 CTDSPLO15194 276 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 MED6O75586 246 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 ADAP1O75689 374 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
LMNA-223ENST00000515459 CDKN1BP46527 198 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 AKR1C1Q04828 323 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 IL18Q14116 193 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 ESRGQ1W209 222 aa10.9□□□□□ -0.66
LMNA-223ENST00000515459 CIB3Q96Q77 187 aaPredicted RBP10.9□□□□□ -0.66
LMNA-223ENST00000515459 H7BYZ3 331 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 ZNF701M0R085 212 aaPredicted RBP10.89□□□□□ -0.67
LMNA-223ENST00000515459 INAFM2P0DMQ5 153 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 CXCL3P19876 107 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 RAP2BP61225 183 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 PSG3Q16557 428 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 MCUBQ9NWR8 336 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 ZNF586Q9NXT0 402 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 RABL2AQ9UBK7 228 aaPredicted RBP10.89□□□□□ -0.67
LMNA-223ENST00000515459 RABL2BQ9UNT1 228 aa10.89□□□□□ -0.67
LMNA-223ENST00000515459 MRPS16Q9Y3D3 137 aaKnown RBP10.89□□□□□ -0.67
LMNA-223ENST00000515459 H3BNG1 76 aa10.88□□□□□ -0.67
LMNA-223ENST00000515459 SLC25A6P12236 298 aa10.88□□□□□ -0.67
LMNA-223ENST00000515459 HOXA5P20719 270 aa10.88□□□□□ -0.67
LMNA-223ENST00000515459 LINC00612Q8N6U2 182 aa10.88□□□□□ -0.67
LMNA-223ENST00000515459 LRRC20Q8TCA0 184 aa10.88□□□□□ -0.67
LMNA-223ENST00000515459 DIRAS2Q96HU8 199 aa10.88□□□□□ -0.67
LMNA-223ENST00000515459 HIGD1AQ9Y241 93 aa10.88□□□□□ -0.67
LMNA-223ENST00000515459 DMBT1Q9UGM3 2413 aaPredicted RBP10.87□□□□□ -0.67
LMNA-223ENST00000515459 A0A087X0K7 114 aa10.87□□□□□ -0.67
LMNA-223ENST00000515459 WRBO00258 174 aa10.87□□□□□ -0.67
LMNA-223ENST00000515459 SYNGR2O43760 224 aa10.87□□□□□ -0.67
LMNA-223ENST00000515459 IL5P05113 134 aa10.87□□□□□ -0.67
LMNA-223ENST00000515459 SPANXN5Q5MJ07 72 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms