RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 HBBP68871 147 aa11.69□□□□□ -0.54
NUP54-217ENST00000514987 LY6DQ14210 128 aa11.69□□□□□ -0.54
NUP54-217ENST00000514987 Q56UQ5 140 aa11.69□□□□□ -0.54
NUP54-217ENST00000514987 RBPMS2Q6ZRY4 209 aaKnown RBP11.69□□□□□ -0.54
NUP54-217ENST00000514987 GOLT1AQ6ZVE7 132 aa11.69□□□□□ -0.54
NUP54-217ENST00000514987 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
NUP54-217ENST00000514987 A0A1W2PS18 150 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 FBLL1A6NHQ2 334 aaKnown RBP11.68□□□□□ -0.54
NUP54-217ENST00000514987 H3BTX0 84 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 MRPS12O15235 138 aaKnown RBP11.68□□□□□ -0.54
NUP54-217ENST00000514987 PSG9Q00887 426 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 SLAQ13239 276 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 KLK9Q2XQG4 91 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 SIGLEC15Q6ZMC9 328 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 DYNAPQ8N1N2 210 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 VN1R17PQ8TDU5 208 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 ZNF414Q96IQ9 312 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 AAMDCQ9H7C9 122 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 KLK9Q9UKQ9 250 aa11.68□□□□□ -0.54
NUP54-217ENST00000514987 ABCA4P78363 2273 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 KIR2DL5BA0A0G2JN68 375 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 KIR2DL5BA0A0G2JPC4 375 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 A0A1W2PPR1 153 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 F2Z2F3 143 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 ZNF324O75467 553 aaPredicted RBP11.67□□□□□ -0.54
NUP54-217ENST00000514987 GOSR1O95249 250 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 COL8A1P27658 744 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 KLF17Q5JT82 389 aaPredicted RBP11.67□□□□□ -0.54
NUP54-217ENST00000514987 TEX43Q6ZNM6 134 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 PRNTQ86SH4 94 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 KIR2DL5AQ8N109 375 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 POLR3KQ9Y2Y1 108 aaPredicted RBP11.67□□□□□ -0.54
NUP54-217ENST00000514987 RPL7P18124 248 aaKnown RBP11.67□□□□□ -0.54
NUP54-217ENST00000514987 AMTP48728 403 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 PSG3Q16557 428 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 CYB5R2Q6BCY4 276 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 C16orf54Q6UWD8 224 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 Q8N9W7 124 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
NUP54-217ENST00000514987 ADGRG4Q8IZF6 3080 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 CSN1S1P47710 185 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 FOXA3P55318 350 aaPredicted RBP11.66□□□□□ -0.54
NUP54-217ENST00000514987 LMO4P61968 165 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 NDPQ00604 133 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 GDF5OSQ5U4N7 250 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 UNQ6494/PRO21346Q6UXR6 183 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 LINC00322Q6ZN03 302 aaPredicted RBP11.66□□□□□ -0.54
NUP54-217ENST00000514987 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 FAM110DQ8TAY7 271 aaPredicted RBP11.66□□□□□ -0.54
NUP54-217ENST00000514987 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 ALKBH7Q9BT30 221 aaPredicted RBP11.66□□□□□ -0.54
NUP54-217ENST00000514987 NRN1Q9NPD7 142 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 PSG8Q9UQ74 426 aa11.66□□□□□ -0.54
NUP54-217ENST00000514987 TPRP12270 2363 aaKnown RBP11.65□□□□□ -0.54
NUP54-217ENST00000514987 A0A1B0GW15 77 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 DIRC3C9JPN6 131 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 F8W735 103 aaPredicted RBP11.65□□□□□ -0.54
NUP54-217ENST00000514987 NDUFS7O75251 213 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 NDUFB8O95169 186 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 EGR2P11161 476 aaPredicted RBP11.65□□□□□ -0.54
NUP54-217ENST00000514987 CAMPP49913 170 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 Q6AWC8 147 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 FBXL7Q9UJT9 491 aa11.65□□□□□ -0.54
NUP54-217ENST00000514987 OVOL3O00110 214 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 HAX1O00165 279 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 RAB9AP51151 201 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 FBLN7Q53RD9 439 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 OR2D3Q8NGH3 330 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 GTSF1Q8WW33 167 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 BORCS7Q96B45 105 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 RCHY1Q96PM5 261 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 IGF2RP11717 2491 aa11.64□□□□□ -0.55
NUP54-217ENST00000514987 ARHGAP32A7KAX9 2087 aa11.63□□□□□ -0.55
NUP54-217ENST00000514987 VWC2LB2RUY7 222 aa11.63□□□□□ -0.55
NUP54-217ENST00000514987 RAB4AP20338 218 aa11.63□□□□□ -0.55
NUP54-217ENST00000514987 PMCHP20382 165 aa11.63□□□□□ -0.55
NUP54-217ENST00000514987 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
NUP54-217ENST00000514987 CIARTQ8N365 385 aaPredicted RBP11.63□□□□□ -0.55
NUP54-217ENST00000514987 PGLYRP4Q96LB8 373 aa11.63□□□□□ -0.55
NUP54-217ENST00000514987 C2orf88Q9BSF0 95 aa11.63□□□□□ -0.55
NUP54-217ENST00000514987 VAMP8Q9BV40 100 aa11.63□□□□□ -0.55
NUP54-217ENST00000514987 ZMAT5Q9UDW3 170 aaKnown RBP11.63□□□□□ -0.55
NUP54-217ENST00000514987 TRAV8-1A0A0A6YYK1 113 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 NPFFO15130 113 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 HSBP1O75506 76 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 CTSGP08311 255 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 SAA4P35542 130 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 KRTDAPP60985 99 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 AJUBAQ96IF1 538 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 C17orf77Q96MU5 243 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 CHEK1O14757 476 aa11.62□□□□□ -0.55
NUP54-217ENST00000514987 CT45A10P0DMU9 189 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms