RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 GABARAPO95166 117 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 SLC25A5P05141 298 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 T-ENOLP0DO92 83 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 CMC4P56277 68 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 CXCL6P80162 114 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 HOXC5Q00444 222 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 TDRG1Q3Y452 100 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 SLC25A34Q6PIV7 304 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 UNQ5815/PRO19632Q6UWF5 114 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 TTC9CQ8N5M4 171 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 RPS4Y2Q8TD47 263 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 TOMM6Q96B49 74 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 SAR1AQ9NR31 198 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 C5orf42Q9H799 3197 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGKV1-9A0A0C4DH69 117 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 TRBV7-6A0A0J9YX20 115 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 A0A1W2PS18 150 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 LOC730098B7Z3J9 87 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 NTN3O00634 580 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 HLA-DPB1P04440 258 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 TGIF1Q15583 401 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 RRN3P1Q2M238 152 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 IZUMO2Q6UXV1 221 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 PLA2G12AQ9BZM1 189 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 ARID1AO14497 2285 aa4.56□□□□□ -1.68
TRAPPC11-209ENST00000512476 TRGV10A0A0A0MS01 117 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 APOC3P02656 99 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 MT-ATP8P03928 68 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGKV1-16P04430 117 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 IL9P15248 144 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 PLGLB1Q02325 96 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 Q6AWC8 147 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 LCNL1Q6ZST4 164 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 SUMF2Q8NBJ7 301 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 RTN4IP1Q8WWV3 396 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 TMEM204Q9BSN7 226 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 C21orf62Q9NYP8 219 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 CKLFQ9UBR5 152 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 DNAJC15Q9Y5T4 150 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 SZT2Q5T011 3432 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGKV1-6A0A0C4DH72 117 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 A0A0J9YXY3 114 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 KRTAP16-1A8MUX0 517 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 KRTAP4-16G5E9R7 235 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 KRASP01116 189 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 INPP1P49441 399 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 Q6ZS52 159 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 RNF182Q8N6D2 247 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF524Q96C55 264 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 Q9H3A6 140 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 SLC25A22Q9H936 323 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 KLK5Q9Y337 293 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 IER3IP1Q9Y5U9 82 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 NUP210LQ5VU65 1888 aa4.55□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGLV4-3A0A075B6K6 122 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 UBE2L6O14933 153 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGLC1P0CG04 106 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 ORMDL2Q53FV1 153 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 AADACL3Q5VUY0 350 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 ALKAL2Q6UX46 152 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGFL3Q6UXB1 125 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 AAED1Q7RTV5 226 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 DEFB123Q8N688 67 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 LSM10Q969L4 123 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 MIEN1Q9BRT3 115 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 HDHD3Q9BSH5 251 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF286AQ9HBT8 521 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 TAS2R8Q9NYW2 309 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 AK3Q9UIJ7 227 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 C10orf142B7Z368 130 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGLV3-19P01714 112 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 LINC00032P0C843 101 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 IFITM1P13164 125 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 SNRPD3P62318 126 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 MRPL54Q6P161 138 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 SCRT2Q9NQ03 307 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 BRWD1Q9NSI6 2320 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 XIRP2A4UGR9 3374 aa4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 TNRC6AQ8NDV7 1962 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGHV4-30-2A0A087WSY4 118 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 OR2T8A6NH00 312 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 RPL36A-HNRNPH2H7BZ11 118 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 BGLAPP02818 100 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 KISS1Q15726 138 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 DAND5Q8N907 189 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZFP62Q8NB50 900 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 TTTY13Q9BZ97 58 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 ATG5Q9H1Y0 275 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 EPDR1Q9UM22 224 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 CSAG2Q9Y5P2 127 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 TRPM6Q9BX84 2022 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGHV3-35A0A0C4DH35 117 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 MT-ND6P03923 174 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 ELK1P19419 428 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 DSCR9P59020 149 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 HBBP68871 147 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms