RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SPP1	P10451	314 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	ZNF726P1	Q15940	193 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	ZNF124	Q15973	351 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	GUCA2B	Q16661	112 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	PXDC1	Q5TGL8	231 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107		Q6ZRG5	221 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	ZNF709	Q8N972	641 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	OR2K2	Q8NGT1	345 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	OR2G3	Q8NGZ4	309 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	PPP1R14B	Q96C90	147 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	PSMG3	Q9BT73	122 aa	Predicted RBP	10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	ZNF471	Q9BX82	626 aa	Predicted RBP	10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	SORL1	Q92673	2214 aa		10.86	□□□□□ -0.67
MATR3-238	ENST00000512107	KANTR	A0A1W2PQU2	76 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107		A0A1W2PS18	150 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	C17orf112	F2Z3M2	114 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107		H3BQ15	152 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107		K7EIL1	84 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107		K7EQG2	157 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	HMGB3	O15347	200 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	PFDN1	O60925	122 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	JTB	O76095	146 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	PYY	P10082	97 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	DEFB1	P60022	68 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	C1orf194	Q5T5A4	169 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	FAM78B	Q5VT40	261 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	IGFL4	Q6B9Z1	124 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	FAM122C	Q6P4D5	195 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	SIGLEC15	Q6ZMC9	328 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	RPP25L	Q8N5L8	163 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	OR1L4	Q8NGR5	311 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	DCANP1	Q8TF63	244 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	C20orf173	Q96LM9	149 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	RPRM	Q9NS64	109 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	UBQLN2	Q9UHD9	624 aa		10.85	□□□□□ -0.67
MATR3-238	ENST00000512107	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	TRAV8-2	A0A0B4J237	113 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	TRAV25	A0A0B4J276	109 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	HLA-DMB	P28068	263 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	FHIT	P49789	147 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	ODF3L2	Q3SX64	289 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	LCN12	Q6JVE5	192 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	OR8I2	Q8N0Y5	310 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	STXBP6	Q8NFX7	210 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	STOML3	Q8TAV4	291 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	GATAD1	Q8WUU5	269 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	CITED4	Q96RK1	184 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	FUT9	Q9Y231	359 aa		10.84	□□□□□ -0.67
MATR3-238	ENST00000512107	SLC17A3	O00476	420 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	M6PR	P20645	277 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	RPL11	P62913	178 aa	Known RBP	10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	OR10G4	Q8NGN3	311 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	OR10G9	Q8NGN4	311 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	OR10G7	Q8NGN6	311 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	PFDN5	Q99471	154 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	GPR61	Q9BZJ8	451 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	ZNF586	Q9NXT0	402 aa		10.83	□□□□□ -0.68
MATR3-238	ENST00000512107	IGLC2	P0DOY2	106 aa		10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	BAP18	Q8IXM2	172 aa		10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	TMED6	Q8WW62	240 aa		10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	GRAMD2B	Q96HH9	432 aa		10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	NARS2	Q96I59	477 aa	Known RBP	10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	SPAG8	Q99932	426 aa	Predicted RBP	10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	TMEM231	Q9H6L2	316 aa		10.82	□□□□□ -0.68
MATR3-238	ENST00000512107	NDUFB4	O95168	129 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	TMEM41B	Q5BJD5	291 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	APRG1	Q8IVJ8	170 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	DEFB125	Q8N687	156 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	FXYD5	Q96DB9	178 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	MAP6D1	Q9H9H5	199 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	NRN1	Q9NPD7	142 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107	KCNIP2	Q9NS61	270 aa		10.81	□□□□□ -0.68
MATR3-238	ENST00000512107		A0A087X0K7	114 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	HELT	A6NFD8	242 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	ZNF688	P0C7X2	276 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	CD81	P60033	236 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	SERF2	P84101	59 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	SLC51B	Q86UW2	128 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	RNF182	Q8N6D2	247 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	RAB24	Q969Q5	203 aa		10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	SAT2	Q96F10	170 aa	Predicted RBP	10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	MRPL32	Q9BYC8	188 aa	Known RBP	10.8	□□□□□ -0.68
MATR3-238	ENST00000512107	DNASE2	O00115	360 aa	Predicted RBP	10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	OR10J4	P0C629	311 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	SEC11B	P0C7V7	166 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	TPT1	P13693	172 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	RPL7	P18124	248 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	BMI1	P35226	326 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	RHOB	P62745	196 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	DEFA6	Q01524	100 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	FAM74A1	Q5RGS3	127 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	TMEM14C	Q9P0S9	112 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	AGRN	O00468	2067 aa		10.79	□□□□□ -0.68
MATR3-238	ENST00000512107	TRAV2	A0A0B4J234	112 aa		10.78	□□□□□ -0.68
MATR3-238	ENST00000512107	STAG3L2	P0CL84	134 aa		10.78	□□□□□ -0.68
MATR3-238	ENST00000512107	STAG3L3	P0CL85	134 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms