RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ACOT7LQ6ZUV0 252 aa9.74□□□□□ -0.85
CCHCR1-227ENST00000508852 IGF2BP2-AS1Q96M15 143 aa9.74□□□□□ -0.85
CCHCR1-227ENST00000508852 TMEM208Q9BTX3 173 aa9.74□□□□□ -0.85
CCHCR1-227ENST00000508852 SRRQ9GZT4 340 aa9.74□□□□□ -0.85
CCHCR1-227ENST00000508852 NPVFQ9HCQ7 196 aa9.74□□□□□ -0.85
CCHCR1-227ENST00000508852 HIGD1AQ9Y241 93 aa9.74□□□□□ -0.85
CCHCR1-227ENST00000508852 LOC102723971A0A1B0GUV8 181 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 OR4E1P0C645 316 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 EMP1P54849 157 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 FXYD7P58549 80 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 DLK1P80370 383 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 OR10P1Q8NGE3 313 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 GGACTQ9BVM4 153 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 SLC25A39Q9BZJ4 359 aaPredicted RBP9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 SLC35B3Q9H1N7 401 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 MGAT4CQ9UBM8 478 aa9.73□□□□□ -0.85
CCHCR1-227ENST00000508852 H3BP45 60 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 H3BRN7 92 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 K7EPK0 472 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 TSC22D2O75157 780 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 INSP01308 110 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 POLR2GP62487 172 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 RNF212Q495C1 297 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 C4orf46Q504U0 113 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 FAM222AQ5U5X8 452 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 TEPPQ6URK8 271 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 ZNF767PQ75MW2 155 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 LRRC20Q8TCA0 184 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 SHANK2-AS3Q9BTD1 123 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 HECTD4Q9Y4D8 3996 aa9.72□□□□□ -0.85
CCHCR1-227ENST00000508852 LYRM9A8MSI8 78 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 SSSCA1O60232 199 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 ADAP1O75689 374 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 LINC00869P0C866 280 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 CXCL2P19875 107 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 DAD1P61803 113 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 LGALS9BQ3B8N2 356 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 TMEM14EPQ6UXP3 125 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 C1orf158Q8N1D5 194 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 TMEM256Q8N2U0 113 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 RBM38Q9H0Z9 239 aaKnown RBP9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 PPP1R14DQ9NXH3 145 aa9.71□□□□□ -0.86
CCHCR1-227ENST00000508852 A0A087X0K7 114 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 F6UB75 175 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 OR5G3P0C626 314 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 GATA2P23769 480 aaPredicted RBP9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 TSPOP30536 169 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 CNN1P51911 297 aaKnown RBP9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 DEFB1P60022 68 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 FGL1Q08830 312 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 IAH1Q2TAA2 248 aaPredicted RBP9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 AMTNQ6UX39 209 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 GSG1LQ6UXU4 331 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 ZNF546Q86UE3 836 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 ZNF738Q8NE65 137 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 C20orf173Q96LM9 149 aa9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 YTHDF2Q9Y5A9 579 aaKnown RBP9.7□□□□□ -0.86
CCHCR1-227ENST00000508852 PMS2P5A8MQ11 134 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 GOSR2O14653 212 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 RAB31Q13636 194 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 BAK1Q16611 211 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 OR11H7Q8NGC8 314 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 MITD1Q8WV92 249 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 SCRT1Q9BWW7 348 aa9.69□□□□□ -0.86
CCHCR1-227ENST00000508852 BOLA2-SMG1P6H3BVE0 249 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 SCGB1D2O95969 90 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 METTL15P1P0C7V9 234 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 ANXA7P20073 488 aaKnown RBP9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 ZNF846Q147U1 533 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 PSG3Q16557 428 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 LCN15Q6UWW0 184 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 TMEM182Q6ZP80 229 aaPredicted RBP9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 ZBTB8BQ8NAP8 495 aaPredicted RBP9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 SLC50A1Q9BRV3 221 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 ARL6Q9H0F7 186 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 ARV1Q9H2C2 271 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 NDUFA13Q9P0J0 144 aa9.68□□□□□ -0.86
CCHCR1-227ENST00000508852 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 L7N2F9 121 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 RRAS2P62070 204 aaPredicted RBP9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 RHOBP62745 196 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 VAMP2P63027 116 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 BPIFA4PQ86YQ2 179 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 OR8A1Q8NGG7 326 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 C17orf77Q96MU5 243 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 C20orf144Q9BQM9 153 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 GSKIPQ9P0R6 139 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 FLVCR2Q9UPI3 526 aa9.67□□□□□ -0.86
CCHCR1-227ENST00000508852 IL7P13232 177 aa9.66□□□□□ -0.86
CCHCR1-227ENST00000508852 HTN3P15516 51 aa9.66□□□□□ -0.86
CCHCR1-227ENST00000508852 CXCL3P19876 107 aa9.66□□□□□ -0.86
CCHCR1-227ENST00000508852 TAS2R60P59551 318 aa9.66□□□□□ -0.86
CCHCR1-227ENST00000508852 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms