RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 FXYD5Q96DB9 178 aa20.27■□□□□ 0.84
HOXB3-212ENST00000498678 CHRDL1Q9BU40 450 aa20.27■□□□□ 0.84
HOXB3-212ENST00000498678 VPREB3Q9UKI3 123 aa20.27■□□□□ 0.84
HOXB3-212ENST00000498678 M0R143 59 aa20.27■□□□□ 0.83
HOXB3-212ENST00000498678 OR2C1O95371 312 aa20.27■□□□□ 0.83
HOXB3-212ENST00000498678 STXBP6Q8NFX7 210 aa20.27■□□□□ 0.83
HOXB3-212ENST00000498678 TMEM208Q9BTX3 173 aa20.27■□□□□ 0.83
HOXB3-212ENST00000498678 LEMD1Q68G75 181 aa20.26■□□□□ 0.83
HOXB3-212ENST00000498678 CCDC140Q96MF4 163 aa20.26■□□□□ 0.83
HOXB3-212ENST00000498678 SDF2L1Q9HCN8 221 aa20.26■□□□□ 0.83
HOXB3-212ENST00000498678 SCGB2A1O75556 95 aa20.25■□□□□ 0.83
HOXB3-212ENST00000498678 GPR183P32249 361 aa20.25■□□□□ 0.83
HOXB3-212ENST00000498678 JOSD1Q15040 202 aaPredicted RBP20.25■□□□□ 0.83
HOXB3-212ENST00000498678 NDUFB4O95168 129 aa20.25■□□□□ 0.83
HOXB3-212ENST00000498678 CLEC3BP05452 202 aa20.25■□□□□ 0.83
HOXB3-212ENST00000498678 EEF1AKMT3Q96AZ1 226 aa20.25■□□□□ 0.83
HOXB3-212ENST00000498678 SCO2A0A1W2PP80 73 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 A0A1W2PRE2 83 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 FAM223BA6NKX1 122 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 BRI3O95415 125 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 SNRPCP09234 159 aaKnown RBP20.24■□□□□ 0.83
HOXB3-212ENST00000498678 ATP5G2Q06055 141 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 KRTAP1-1Q07627 177 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 IL17RELQ6ZVW7 336 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 FAM223AQ8IWN6 122 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 TRBV7-1A0A0A6YYK4 115 aa20.24■□□□□ 0.83
HOXB3-212ENST00000498678 HOXA3O43365 443 aaPredicted RBP20.24■□□□□ 0.83
HOXB3-212ENST00000498678 RPS10P46783 165 aaKnown RBP20.24■□□□□ 0.83
HOXB3-212ENST00000498678 EREGO14944 169 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 TRGV3P03979 118 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 GP9P14770 177 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 TMEM241Q24JQ0 296 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 ZNF414Q96IQ9 312 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 ATG101Q9BSB4 218 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 SHANK2-AS3Q9BTD1 123 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 NAT8Q9UHE5 227 aa20.23■□□□□ 0.83
HOXB3-212ENST00000498678 GGTLC3B5MD39 225 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 PNRC1Q12796 327 aaPredicted RBP20.22■□□□□ 0.83
HOXB3-212ENST00000498678 CLEC19AQ6UXS0 136 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 TEX29Q8N6K0 151 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 DERL1Q9BUN8 251 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 ZNF580Q9UK33 172 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 H3BRN7 92 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 H3BUA1 57 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 ZNF343Q6P1L6 599 aa20.22■□□□□ 0.83
HOXB3-212ENST00000498678 FASNP49327 2511 aaKnown RBP20.21■□□□□ 0.83
HOXB3-212ENST00000498678 C11orf52Q96A22 123 aa20.21■□□□□ 0.83
HOXB3-212ENST00000498678 SUMO1P63165 101 aaKnown RBP20.21■□□□□ 0.83
HOXB3-212ENST00000498678 CFHR3Q02985 330 aa20.21■□□□□ 0.83
HOXB3-212ENST00000498678 HECTD1Q9ULT8 2610 aa20.2■□□□□ 0.82
HOXB3-212ENST00000498678 FLNAP21333 2647 aaKnown RBP20.2■□□□□ 0.82
HOXB3-212ENST00000498678 TPPP2P59282 170 aa20.2■□□□□ 0.82
HOXB3-212ENST00000498678 SNHG12Q9BXW3 62 aa20.2■□□□□ 0.82
HOXB3-212ENST00000498678 TMEM14CQ9P0S9 112 aa20.2■□□□□ 0.82
HOXB3-212ENST00000498678 PHOX2AO14813 284 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 TGOLN2O43493 480 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 CD5LO43866 347 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 IGLV1-40P01703 118 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 TMEM95Q3KNT9 176 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 ZNF664Q8N3J9 261 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 NBEAP1P0C6P0 100 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 SIGLECL1Q8N7X8 197 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 ATP6V0BQ99437 205 aa20.19■□□□□ 0.82
HOXB3-212ENST00000498678 IGHV3-35A0A0C4DH35 117 aa20.18■□□□□ 0.82
HOXB3-212ENST00000498678 KLK15Q9H2R5 256 aa20.18■□□□□ 0.82
HOXB3-212ENST00000498678 MXRA5Q9NR99 2828 aa20.18■□□□□ 0.82
HOXB3-212ENST00000498678 B4DEV8 164 aa20.18■□□□□ 0.82
HOXB3-212ENST00000498678 BLNKQ8WV28 456 aa20.18■□□□□ 0.82
HOXB3-212ENST00000498678 PACRGQ96M98 296 aaPredicted RBP20.18■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BKO60814 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BJP06899 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BOP23527 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 CRYBB3P26998 211 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BBP33778 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BDP58876 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BCP62807 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 RPL23P62829 140 aaKnown RBP20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST2H2BEQ16778 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BHQ93079 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BNQ99877 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 HIST1H2BMQ99879 126 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 ELOVL1Q9BW60 279 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 A0A087WWC5 75 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 PF4V1P10720 104 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 S100A7AQ86SG5 101 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 USMG5Q96IX5 58 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 GNB4Q9HAV0 340 aa20.17■□□□□ 0.82
HOXB3-212ENST00000498678 MYCNOSP40205 109 aa20.16■□□□□ 0.82
HOXB3-212ENST00000498678 TOMM20LQ6UXN7 152 aa20.16■□□□□ 0.82
HOXB3-212ENST00000498678 NPSP0C0P6 89 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 RANP62826 216 aaKnown RBP20.15■□□□□ 0.82
HOXB3-212ENST00000498678 ADIRFQ15847 76 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 ZNF329Q86UD4 541 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 PRSS22Q9GZN4 317 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 ZFAND3Q9H8U3 227 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 TRBV20OR9-2A0A075B6H5 130 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 A0A1W2PPQ1 181 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 GCGP01275 180 aa20.15■□□□□ 0.82
HOXB3-212ENST00000498678 FABP4P15090 132 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms