RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SPINK7P58062 85 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 BCL2L15Q5TBC7 163 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 TEN1Q86WV5 123 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 EXOC3-AS1Q8N2X6 119 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 CANT1Q8WVQ1 401 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 KIFC1Q9BW19 673 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 SLC22A13Q9Y226 551 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 PHRF1Q9P1Y6 1649 aaKnown RBP0.04□□□□□ -2.4
SMC4-227ENST00000497984 ZFC3H1O60293 1989 aaKnown RBP0.03□□□□□ -2.4
SMC4-227ENST00000497984 NCOR2Q9Y618 2525 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 PPYP01298 95 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 DYNLT3P51808 116 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 UBE2BP63146 152 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 CDK6Q00534 326 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 PATE2Q6UY27 113 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 POP5Q969H6 163 aaKnown RBP0.03□□□□□ -2.4
SMC4-227ENST00000497984 MUCL1Q96DR8 90 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 FAM103A1Q9BTL3 118 aaKnown RBP0.03□□□□□ -2.4
SMC4-227ENST00000497984 NPCDR1Q9BY65 106 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 IMUPQ9GZP8 106 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 PBOV1Q9GZY1 135 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 NMNAT1Q9HAN9 279 aaPredicted RBP0.03□□□□□ -2.4
SMC4-227ENST00000497984 ASH1LQ9NR48 2969 aaKnown RBP0.03□□□□□ -2.4
SMC4-227ENST00000497984 MED29Q9NX70 200 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 BPTFQ12830 3046 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 ECM29Q5VYK3 1845 aa0.03□□□□□ -2.4
SMC4-227ENST00000497984 NCOR1O75376 2440 aa0.03□□□□□ -2.41
SMC4-227ENST00000497984 BSNQ9UPA5 3926 aa0.03□□□□□ -2.41
SMC4-227ENST00000497984 KCPQ6ZWJ8 1503 aa0.03□□□□□ -2.41
SMC4-227ENST00000497984 SONP18583 2426 aaKnown RBP0.02□□□□□ -2.41
SMC4-227ENST00000497984 TAF1LQ8IZX4 1826 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 NUPR2A6NF83 97 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 C17orf112F2Z3M2 114 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 JMJD7-PLA2G4BH0Y9G9 81 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 M0R233 179 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 CST8O60676 142 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 CD14P08571 375 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 HLA-EP13747 358 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 ERVS71-1P61550 626 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 MYL5Q02045 173 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 LIN52Q52LA3 116 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 GOLT1AQ6ZVE7 132 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 OR5AS1Q8N127 324 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 OR10AC1Q8NH08 325 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 CEP192Q8TEP8 1941 aa0.02□□□□□ -2.41
SMC4-227ENST00000497984 NSD1Q96L73 2696 aaPredicted RBP0.02□□□□□ -2.41
SMC4-227ENST00000497984 NAV3Q8IVL0 2385 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 TRAV23DV6A0A075B6W5 121 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 C5orf67F2Z3F1 127 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 HMGB3O15347 200 aaKnown RBP0.01□□□□□ -2.41
SMC4-227ENST00000497984 IFNA7P01567 189 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 SPINT3P49223 89 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 ZNF137PP52743 207 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 SPATA45Q537H7 98 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 C6orf52Q5T4I8 152 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 EIF5AL1Q6IS14 154 aaKnown RBP0.01□□□□□ -2.41
SMC4-227ENST00000497984 TMEM14EPQ6UXP3 125 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 ATOH7Q8N100 152 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 OR10X1Q8NGY0 326 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 ZNF431Q8TF32 576 aaPredicted RBP0.01□□□□□ -2.41
SMC4-227ENST00000497984 BTF3L4Q96K17 158 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 TEX37Q96LM6 180 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 ENY2Q9NPA8 101 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 FAM32AQ9Y421 112 aaKnown RBP0.01□□□□□ -2.41
SMC4-227ENST00000497984 VWFP04275 2813 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 BCL9O00512 1426 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 RYR3Q15413 4870 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 ZNF462Q96JM2 2506 aa0.01□□□□□ -2.41
SMC4-227ENST00000497984 STAB2Q8WWQ8 2551 aa0□□□□□ -2.41
SMC4-227ENST00000497984 TRBV30A0A0K0K1B3 111 aa0□□□□□ -2.41
SMC4-227ENST00000497984 GGCTO75223 188 aaKnown RBP0□□□□□ -2.41
SMC4-227ENST00000497984 C1QBP02746 253 aa0□□□□□ -2.41
SMC4-227ENST00000497984 CRHP06850 196 aa0□□□□□ -2.41
SMC4-227ENST00000497984 CST2P09228 141 aa0□□□□□ -2.41
SMC4-227ENST00000497984 OR10J4P0C629 311 aa0□□□□□ -2.41
SMC4-227ENST00000497984 TAF1AQ15573 450 aaPredicted RBP0□□□□□ -2.41
SMC4-227ENST00000497984 EML6Q6ZMW3 1958 aa0□□□□□ -2.41
SMC4-227ENST00000497984 ARPINQ7Z6K5 226 aa0□□□□□ -2.41
SMC4-227ENST00000497984 MEGF8Q7Z7M0 2845 aa0□□□□□ -2.41
SMC4-227ENST00000497984 OR5D16Q8NGK9 328 aa0□□□□□ -2.41
SMC4-227ENST00000497984 OR10AG1Q8NH19 301 aa0□□□□□ -2.41
SMC4-227ENST00000497984 CHCHD1Q96BP2 118 aaKnown RBP0□□□□□ -2.41
SMC4-227ENST00000497984 OR52A1Q9UKL2 312 aa0□□□□□ -2.41
SMC4-227ENST00000497984 ARL5AQ9Y689 179 aa0□□□□□ -2.41
SMC4-227ENST00000497984 NBEAL2Q6ZNJ1 2754 aa-0□□□□□ -2.41
SMC4-227ENST00000497984 HECTD1Q9ULT8 2610 aa-0□□□□□ -2.41
SMC4-227ENST00000497984 HMCN2Q8NDA2 5059 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 DOCK3Q8IZD9 2030 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 ZNF106Q9H2Y7 1883 aaKnown RBP-0.01□□□□□ -2.41
SMC4-227ENST00000497984 DOCK5Q9H7D0 1870 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 TRAV27A0A087WT01 109 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 CTXN2P0C2S0 81 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 NFYBP25208 207 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 RAB5CP51148 216 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 INSL3P51460 131 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 FXYD4P59646 89 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 EIF3IQ13347 325 aaKnown RBP-0.01□□□□□ -2.41
SMC4-227ENST00000497984 SPA17Q15506 151 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 Q6ZS92 163 aa-0.01□□□□□ -2.41
SMC4-227ENST00000497984 TSKUQ8WUA8 353 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms