RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PRSS46E5RG02 174 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 ETFRF1Q6IPR1 90 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 C5orf17Q8NAS9 161 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.77□□□□□ -0.69
GPC1-209ENST00000495100 KLK15Q9H2R5 256 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 A0A1W2PRE2 83 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 CLEC3BP05452 202 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 CSN1S1P47710 185 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 C1orf194Q5T5A4 169 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 GPR82Q96P67 336 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 AAMDCQ9H7C9 122 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 FCER1GP30273 86 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 CA7P43166 264 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 TXNDC17Q9BRA2 123 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 F11RQ9Y624 299 aaKnown RBP10.76□□□□□ -0.69
GPC1-209ENST00000495100 IZUMO1RA6ND01 250 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 FCN3O75636 299 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 CGB3P0DN86 165 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 CGB7P0DN87 165 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 CD99P14209 185 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 SELENOTP62341 195 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 TCF15Q12870 199 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 OR5AN1Q8NGI8 311 aa10.76□□□□□ -0.69
GPC1-209ENST00000495100 K7EQM0 130 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 C18orf32Q8TCD1 76 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 RAB37Q96AX2 223 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 FBLL1A6NHQ2 334 aaKnown RBP10.75□□□□□ -0.69
GPC1-209ENST00000495100 NUTF2P61970 127 aaKnown RBP10.75□□□□□ -0.69
GPC1-209ENST00000495100 NDPQ00604 133 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 CDSNQ15517 529 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 TWIST1Q15672 202 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 TMEM167AQ8TBQ9 72 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 OR4C46A6NHA9 309 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 SRD5A1P18405 259 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 CEACAM8P31997 349 aaPredicted RBP10.75□□□□□ -0.69
GPC1-209ENST00000495100 HBBP68871 147 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 BPIFA4PQ86YQ2 179 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 CACNG8Q8WXS5 425 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
GPC1-209ENST00000495100 SLC25A39Q9BZJ4 359 aaPredicted RBP10.75□□□□□ -0.69
GPC1-209ENST00000495100 PTPRBP23467 1997 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 TYMSP04818 313 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 ARMS2P0C7Q2 107 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 SP5Q6BEB4 398 aaPredicted RBP10.74□□□□□ -0.69
GPC1-209ENST00000495100 C8orf49Q96NF6 230 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 RAB1BQ9H0U4 201 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 RPP21Q9H633 154 aaKnown RBP10.74□□□□□ -0.69
GPC1-209ENST00000495100 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.74□□□□□ -0.69
GPC1-209ENST00000495100 HTN1P15515 57 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 EVI2AP22794 236 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 S100A7P31151 101 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 LGALS7P47929 136 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 IGFL2Q6UWQ7 119 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 APOHP02749 345 aaPredicted RBP10.74□□□□□ -0.69
GPC1-209ENST00000495100 TCRAP04437 139 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 NMUP48645 174 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 MEF2CQ06413 473 aaPredicted RBP10.74□□□□□ -0.69
GPC1-209ENST00000495100 TPTE2P1Q5T6R2 138 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 GDF5OSQ5U4N7 250 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 ZNF833PQ6ZTB9 187 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 LURAP1LQ8IV03 231 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 GNB1LQ9BYB4 327 aa10.74□□□□□ -0.69
GPC1-209ENST00000495100 LOC105371242A0A075B767 164 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 C9JCJ5 164 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 BUB1B-PAK6H3BSN5 160 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 MT-ND6P03923 174 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 LCNL1Q6ZST4 164 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 OR4A5Q8NH83 315 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 IGLC7A0M8Q6 106 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 TMEM213A2RRL7 107 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 NUDT3O95989 172 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 CFHR2P36980 270 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 GATA4P43694 442 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 LINC00310P59036 64 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 BRD3OSQ6XYD6 125 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 C1orf174Q8IYL3 243 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 RNF182Q8N6D2 247 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 Q8NA96 180 aa10.73□□□□□ -0.69
GPC1-209ENST00000495100 LIPFP07098 398 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 RELQ04864 619 aaPredicted RBP10.72□□□□□ -0.69
GPC1-209ENST00000495100 ZNF124Q15973 351 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 ZNF596Q8TC21 504 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 GRAMD2BQ96HH9 432 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 MRPL32Q9BYC8 188 aaKnown RBP10.72□□□□□ -0.69
GPC1-209ENST00000495100 UTP20O75691 2785 aaKnown RBP10.72□□□□□ -0.69
GPC1-209ENST00000495100 C20orf202A1L168 122 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 TMEM155Q4W5P6 130 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 DPM3Q9P2X0 92 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 SHISA9B4DS77 424 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 B9A039 149 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 TMPRSS3P57727 454 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms