RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FXYD7P58549 80 aa24.06■■□□□ 1.44
CBX4-203ENST00000494546 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa24.06■■□□□ 1.44
CBX4-203ENST00000494546 C17orf77Q96MU5 243 aa24.06■■□□□ 1.44
CBX4-203ENST00000494546 SHANK2-AS3Q9BTD1 123 aa24.06■■□□□ 1.44
CBX4-203ENST00000494546 F6UB75 175 aa24.05■■□□□ 1.44
CBX4-203ENST00000494546 PLP1P60201 277 aa24.05■■□□□ 1.44
CBX4-203ENST00000494546 EBLN2Q6P2I7 272 aa24.05■■□□□ 1.44
CBX4-203ENST00000494546 C20orf173Q96LM9 149 aa24.05■■□□□ 1.44
CBX4-203ENST00000494546 GGACTQ9BVM4 153 aa24.05■■□□□ 1.44
CBX4-203ENST00000494546 UPK1BO75841 260 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 LY6G6CO95867 125 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 CAV2P51636 162 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 ENKURQ8TC29 256 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 UHRF2Q96PU4 802 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 ARL6Q9H0F7 186 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 RPRMQ9NS64 109 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 PTTG2Q9NZH5 202 aa24.04■■□□□ 1.44
CBX4-203ENST00000494546 DEDDO75618 318 aa24.03■■□□□ 1.44
CBX4-203ENST00000494546 FGL1Q08830 312 aa24.03■■□□□ 1.44
CBX4-203ENST00000494546 DNAH1Q9P2D7 4330 aa24.03■■□□□ 1.44
CBX4-203ENST00000494546 GOSR2O14653 212 aa24.02■■□□□ 1.44
CBX4-203ENST00000494546 S100A10P60903 97 aa24.02■■□□□ 1.44
CBX4-203ENST00000494546 SPATA31B1PQ5VZV4 182 aa24.02■■□□□ 1.44
CBX4-203ENST00000494546 PLECQ15149 4684 aaKnown RBP24.01■■□□□ 1.43
CBX4-203ENST00000494546 ELOA3CA0A087WX78 387 aaPredicted RBP24.01■■□□□ 1.43
CBX4-203ENST00000494546 RPL7P18124 248 aaKnown RBP24.01■■□□□ 1.43
CBX4-203ENST00000494546 PVALBP20472 110 aaPredicted RBP24.01■■□□□ 1.43
CBX4-203ENST00000494546 FAM78BQ5VT40 261 aa24.01■■□□□ 1.43
CBX4-203ENST00000494546 ZNF546Q86UE3 836 aa24.01■■□□□ 1.43
CBX4-203ENST00000494546 A0A0J9YX75 114 aa24■■□□□ 1.43
CBX4-203ENST00000494546 FAM24AA6NFZ4 105 aa24■■□□□ 1.43
CBX4-203ENST00000494546 AGPAT2O15120 278 aa24■■□□□ 1.43
CBX4-203ENST00000494546 CST7O76096 145 aa24■■□□□ 1.43
CBX4-203ENST00000494546 IGFL4Q6B9Z1 124 aa24■■□□□ 1.43
CBX4-203ENST00000494546 S100A7AQ86SG5 101 aa24■■□□□ 1.43
CBX4-203ENST00000494546 CLUHP3Q96NS8 147 aa24■■□□□ 1.43
CBX4-203ENST00000494546 HRH4Q9H3N8 390 aa24■■□□□ 1.43
CBX4-203ENST00000494546 C11orf1Q9H5F2 150 aa24■■□□□ 1.43
CBX4-203ENST00000494546 ALMS1Q8TCU4 4167 aa23.99■■□□□ 1.43
CBX4-203ENST00000494546 PATE2Q6UY27 113 aa23.99■■□□□ 1.43
CBX4-203ENST00000494546 ZNF709Q8N972 641 aa23.99■■□□□ 1.43
CBX4-203ENST00000494546 SLC35B3Q9H1N7 401 aa23.99■■□□□ 1.43
CBX4-203ENST00000494546 ARV1Q9H2C2 271 aa23.99■■□□□ 1.43
CBX4-203ENST00000494546 PSG9Q00887 426 aa23.98■■□□□ 1.43
CBX4-203ENST00000494546 MGST2Q99735 147 aa23.98■■□□□ 1.43
CBX4-203ENST00000494546 IGHV3OR16-12A0A075B7B8 117 aa23.97■■□□□ 1.43
CBX4-203ENST00000494546 HLA-DMBP28068 263 aa23.97■■□□□ 1.43
CBX4-203ENST00000494546 IFITM3Q01628 133 aa23.97■■□□□ 1.43
CBX4-203ENST00000494546 RAB32Q13637 225 aa23.97■■□□□ 1.43
CBX4-203ENST00000494546 GPN1Q9HCN4 374 aaPredicted RBP23.97■■□□□ 1.43
CBX4-203ENST00000494546 TRAV8-2A0A0B4J237 113 aa23.96■■□□□ 1.43
CBX4-203ENST00000494546 IL15RAQ13261 267 aa23.96■■□□□ 1.43
CBX4-203ENST00000494546 PXDC1Q5TGL8 231 aa23.96■■□□□ 1.43
CBX4-203ENST00000494546 RNF182Q8N6D2 247 aa23.96■■□□□ 1.43
CBX4-203ENST00000494546 ZNF705AQ6ZN79 300 aaPredicted RBP23.95■■□□□ 1.42
CBX4-203ENST00000494546 C2CD4CQ8TF44 421 aa23.95■■□□□ 1.42
CBX4-203ENST00000494546 LYRM2Q9NU23 88 aaPredicted RBP23.94■■□□□ 1.42
CBX4-203ENST00000494546 HYDINQ4G0P3 5121 aa23.94■■□□□ 1.42
CBX4-203ENST00000494546 COX7A2P2O60397 106 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 CAMLGP49069 296 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 RAB31Q13636 194 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 LINC00305Q7Z4B0 112 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 NRARPQ7Z6K4 114 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 UQCC1Q9NVA1 299 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 CELA1Q9UNI1 258 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 RNF24Q9Y225 148 aa23.93■■□□□ 1.42
CBX4-203ENST00000494546 IGSF23A1L1A6 192 aa23.92■■□□□ 1.42
CBX4-203ENST00000494546 ZNF705FA8MVS1 300 aaPredicted RBP23.92■■□□□ 1.42
CBX4-203ENST00000494546 C11orf94C9JXX5 98 aa23.92■■□□□ 1.42
CBX4-203ENST00000494546 ZNF705DP0CH99 300 aaPredicted RBP23.92■■□□□ 1.42
CBX4-203ENST00000494546 ZNF705BP0CI00 300 aaPredicted RBP23.92■■□□□ 1.42
CBX4-203ENST00000494546 SULT1A1P50225 295 aa23.92■■□□□ 1.42
CBX4-203ENST00000494546 Q6ZTC4 211 aa23.92■■□□□ 1.42
CBX4-203ENST00000494546 TMEM252Q8N6L7 170 aa23.92■■□□□ 1.42
CBX4-203ENST00000494546 LRRC20Q8TCA0 184 aa23.92■■□□□ 1.42
CBX4-203ENST00000494546 A0A087X0K7 114 aa23.91■■□□□ 1.42
CBX4-203ENST00000494546 STX12Q86Y82 276 aa23.91■■□□□ 1.42
CBX4-203ENST00000494546 ZNF738Q8NE65 137 aa23.91■■□□□ 1.42
CBX4-203ENST00000494546 NEU1Q99519 415 aa23.91■■□□□ 1.42
CBX4-203ENST00000494546 SIX6O95475 246 aa23.9■■□□□ 1.42
CBX4-203ENST00000494546 CNN1P51911 297 aaKnown RBP23.9■■□□□ 1.42
CBX4-203ENST00000494546 GOLT1BQ9Y3E0 138 aa23.9■■□□□ 1.42
CBX4-203ENST00000494546 DUSP14O95147 198 aaKnown RBP23.89■■□□□ 1.41
CBX4-203ENST00000494546 S100A11P31949 105 aa23.89■■□□□ 1.41
CBX4-203ENST00000494546 MIC13Q5XKP0 118 aa23.89■■□□□ 1.41
CBX4-203ENST00000494546 ZNF767PQ75MW2 155 aa23.89■■□□□ 1.41
CBX4-203ENST00000494546 TMEM37Q8WXS4 190 aa23.89■■□□□ 1.41
CBX4-203ENST00000494546 WDR83OSQ9Y284 106 aa23.89■■□□□ 1.41
CBX4-203ENST00000494546 UBE2L5PA0A1B0GUS4 154 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 SMIM9A6NGZ8 99 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 IGLL5B9A064 214 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 INMT-MINDY4F8WBC2 141 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 CXCL3P19876 107 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 EMP1P54849 157 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 C10orf113Q5VZT2 155 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 AMTNQ6UX39 209 aa23.88■■□□□ 1.41
CBX4-203ENST00000494546 TRAV10A0A0B4J240 114 aa23.87■■□□□ 1.41
CBX4-203ENST00000494546 A8MTW9 85 aa23.87■■□□□ 1.41
CBX4-203ENST00000494546 MRPS12O15235 138 aaKnown RBP23.87■■□□□ 1.41
CBX4-203ENST00000494546 PRAF2O60831 178 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms