RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 Q8NAQ8 132 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 PHLDA1Q8WV24 401 aaPredicted RBP10.97□□□□□ -0.65
USP39-217ENST00000491659 RSG1Q9BU20 258 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 GGACTQ9BVM4 153 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 SCRT1Q9BWW7 348 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 SLC25A39Q9BZJ4 359 aaPredicted RBP10.97□□□□□ -0.65
USP39-217ENST00000491659 RPRMQ9NS64 109 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 IGHV4-28A0A0C4DH34 117 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 PLP1P60201 277 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 NANOS2P60321 138 aaKnown RBP10.96□□□□□ -0.65
USP39-217ENST00000491659 S100A10P60903 97 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 GDF5OSQ5U4N7 250 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 EBLN2Q6P2I7 272 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 SHANK2-AS3Q9BTD1 123 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 GPN1Q9HCN4 374 aaPredicted RBP10.96□□□□□ -0.65
USP39-217ENST00000491659 XCL2Q9UBD3 114 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 RNF24Q9Y225 148 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 X6R8D5 127 aa10.96□□□□□ -0.65
USP39-217ENST00000491659 ALMS1Q8TCU4 4167 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 GOSR2O14653 212 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 DEDDO75618 318 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 IGKV3-20P01619 116 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 RPL7P18124 248 aaKnown RBP10.95□□□□□ -0.66
USP39-217ENST00000491659 DEFB1P60022 68 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 PXDC1Q5TGL8 231 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 OR4B1Q8NGF8 309 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 ARL6Q9H0F7 186 aa10.95□□□□□ -0.66
USP39-217ENST00000491659 AGPAT2O15120 278 aa10.94□□□□□ -0.66
USP39-217ENST00000491659 FGL1Q08830 312 aa10.94□□□□□ -0.66
USP39-217ENST00000491659 CHAC2Q8WUX2 184 aa10.94□□□□□ -0.66
USP39-217ENST00000491659 LINC00476Q8WZB0 136 aa10.94□□□□□ -0.66
USP39-217ENST00000491659 CLUHP3Q96NS8 147 aa10.94□□□□□ -0.66
USP39-217ENST00000491659 UHRF2Q96PU4 802 aa10.94□□□□□ -0.66
USP39-217ENST00000491659 ARV1Q9H2C2 271 aa10.94□□□□□ -0.66
USP39-217ENST00000491659 F6UB75 175 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 CST7O76096 145 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 RBMY1A1P0DJD3 496 aaKnown RBP10.93□□□□□ -0.66
USP39-217ENST00000491659 RBMY1CP0DJD4 496 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 FXYD7P58549 80 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 RAB31Q13636 194 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 RAB32Q13637 225 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 RBMY1FQ15415 496 aaKnown RBP10.93□□□□□ -0.66
USP39-217ENST00000491659 STX12Q86Y82 276 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 C20orf173Q96LM9 149 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 HRH4Q9H3N8 390 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 C11orf1Q9H5F2 150 aa10.93□□□□□ -0.66
USP39-217ENST00000491659 LYRM2Q9NU23 88 aaPredicted RBP10.93□□□□□ -0.66
USP39-217ENST00000491659 DNAH1Q9P2D7 4330 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 A0A0J9YX75 114 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 FAM24AA6NFZ4 105 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 PRAF2O60831 178 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 LY6G6CO95867 125 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 PSG9Q00887 426 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 FAM78BQ5VT40 261 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 AKAP14Q86UN6 197 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 C17orf77Q96MU5 243 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 MGST2Q99735 147 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 UQCC1Q9NVA1 299 aa10.92□□□□□ -0.66
USP39-217ENST00000491659 RYR2Q92736 4967 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 A0A087X0K7 114 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 INMT-MINDY4F8WBC2 141 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 CAMLGP49069 296 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 SULT1A1P50225 295 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 HBG1P69891 147 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 HBG2P69892 147 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 PATE2Q6UY27 113 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 LINC00305Q7Z4B0 112 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 LRRC20Q8TCA0 184 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 MARVELD1Q9BSK0 173 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 SLC35B3Q9H1N7 401 aa10.91□□□□□ -0.66
USP39-217ENST00000491659 IGHV3OR16-12A0A075B7B8 117 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 ELOA3CA0A087WX78 387 aaPredicted RBP10.9□□□□□ -0.66
USP39-217ENST00000491659 UBE2L5PA0A1B0GUS4 154 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 DUSP14O95147 198 aaKnown RBP10.9□□□□□ -0.66
USP39-217ENST00000491659 S100A11P31949 105 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 BAXQ07812 192 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 IL15RAQ13261 267 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 ZNF705AQ6ZN79 300 aaPredicted RBP10.9□□□□□ -0.66
USP39-217ENST00000491659 Q6ZRG5 221 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 RNF182Q8N6D2 247 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 TMEM252Q8N6L7 170 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 ZNF738Q8NE65 137 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 C2CD4CQ8TF44 421 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 GOLT1BQ9Y3E0 138 aa10.9□□□□□ -0.66
USP39-217ENST00000491659 TRAV8-2A0A0B4J237 113 aa10.89□□□□□ -0.67
USP39-217ENST00000491659 IGSF23A1L1A6 192 aa10.89□□□□□ -0.67
USP39-217ENST00000491659 ZNF705FA8MVS1 300 aaPredicted RBP10.89□□□□□ -0.67
USP39-217ENST00000491659 ZNF705DP0CH99 300 aaPredicted RBP10.89□□□□□ -0.67
USP39-217ENST00000491659 ZNF705BP0CI00 300 aaPredicted RBP10.89□□□□□ -0.67
USP39-217ENST00000491659 HLA-DMBP28068 263 aa10.89□□□□□ -0.67
USP39-217ENST00000491659 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
USP39-217ENST00000491659 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
USP39-217ENST00000491659 IGFL4Q6B9Z1 124 aa10.89□□□□□ -0.67
USP39-217ENST00000491659 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms