RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 OR8A1Q8NGG7 326 aa9.06□□□□□ -0.96
EXOSC3-207ENST00000490516 CHAC1Q9BUX1 264 aa9.06□□□□□ -0.96
EXOSC3-207ENST00000490516 DIABLOQ9NR28 239 aa9.06□□□□□ -0.96
EXOSC3-207ENST00000490516 A0A0A6YYH2 397 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 A6NJ64 397 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 SNRPGP15A8MWD9 76 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 NAT1P18440 290 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 HLA-DMAP28067 261 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 TSPAN5P62079 268 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 CIRBP-AS1Q8TBR5 109 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 PARD6GQ9BYG4 376 aaPredicted RBP9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 C8orf4Q9NR00 106 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 TPRKBQ9Y3C4 175 aa9.05□□□□□ -0.96
EXOSC3-207ENST00000490516 CEBPZOSA8MTT3 80 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 PRAF2O60831 178 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 PI3P19957 117 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 SCAND1P57086 179 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 MRPL23Q16540 153 aaKnown RBP9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 PSG3Q16557 428 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 AARDQ4LEZ3 155 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 C10orf126Q8N4M7 172 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 OR52E5Q8NH55 327 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 RNASE11Q8TAA1 199 aaKnown RBP9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 Q9HAA7 133 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 DNAJC4Q9NNZ3 241 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 FUT9Q9Y231 359 aa9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 RCL1Q9Y2P8 373 aaKnown RBP9.04□□□□□ -0.96
EXOSC3-207ENST00000490516 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 ATG12O94817 140 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 CLEC2LP0C7M8 214 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 PGAM2P15259 253 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 UCP3P55916 312 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 RPL37AP61513 92 aaKnown RBP9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 TRIM16LQ309B1 348 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 SP6Q3SY56 376 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 NMSQ5H8A3 153 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 GFI1BQ5VTD9 330 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 OR1B1Q8NGR6 318 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 C20orf144Q9BQM9 153 aa9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 TXNL4BQ9NX01 149 aaKnown RBP9.03□□□□□ -0.96
EXOSC3-207ENST00000490516 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 C3orf85A0A1B0GTC6 90 aa9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 CRYBA4P53673 196 aa9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 PRSS48Q7RTY5 328 aa9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 C8orf49Q96NF6 230 aa9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 GSN-AS1Q9NRJ2 163 aa9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 PRO0255Q9UI72 69 aa9.02□□□□□ -0.97
EXOSC3-207ENST00000490516 TRAV5A0A0B4J249 113 aa9.01□□□□□ -0.97
EXOSC3-207ENST00000490516 GATA2P23769 480 aaPredicted RBP9.01□□□□□ -0.97
EXOSC3-207ENST00000490516 PIGPP57054 158 aa9.01□□□□□ -0.97
EXOSC3-207ENST00000490516 RND3P61587 244 aa9.01□□□□□ -0.97
EXOSC3-207ENST00000490516 MXD1Q05195 221 aa9.01□□□□□ -0.97
EXOSC3-207ENST00000490516 J3KRW8 73 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 LECT2O14960 151 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 FABP1P07148 127 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 CXCL3P19876 107 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 SDC2P34741 201 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 ZNF415Q09FC8 603 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 ODF1Q14990 250 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 NOXA1Q86UR1 476 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 OR4D5Q8NGN0 318 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 CACNG5Q9UF02 275 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 HHLA3Q9XRX5 114 aa9□□□□□ -0.97
EXOSC3-207ENST00000490516 IGKV1OR2-108A0A075B7D4 117 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 TRAV12-3A0A0B4J271 114 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 IBA57-AS1B1ANH7 110 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 GABARAPH6UMI1 98 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 K7EQD1 137 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 GABARAPO95166 117 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 CCDC190Q86UF4 302 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 C11orf72Q8NBR9 251 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 RPUSD4Q96CM3 377 aaKnown RBP8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 ST6GAL2Q96JF0 529 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 SLC35E1Q96K37 410 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 GPR82Q96P67 336 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 TRGV9Q99603 122 aa8.99□□□□□ -0.97
EXOSC3-207ENST00000490516 E5RGE8 158 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 CCNKO75909 580 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 ORM2P19652 201 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 SRIP30626 198 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 FHL2Q14192 279 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 MEF2DQ14814 521 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 FAM219AQ8IW50 185 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 KLF12Q9Y4X4 402 aa8.98□□□□□ -0.97
EXOSC3-207ENST00000490516 GYPEP15421 78 aa8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 RCVRNP35243 200 aa8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 ACOT6Q3I5F7 207 aaPredicted RBP8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 LHFPL5Q8TAF8 219 aa8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 RBPMSQ93062 196 aaKnown RBP8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 ZNF486Q96H40 463 aaPredicted RBP8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 SLC45A2Q9UMX9 530 aa8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 TMEM56-RWDD3S4R434 201 aa8.97□□□□□ -0.97
EXOSC3-207ENST00000490516 IGHV3-38A0A0C4DH36 116 aa8.96□□□□□ -0.98
EXOSC3-207ENST00000490516 SPINK4O60575 86 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms