RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 OR5AC1P0C628 307 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 ZNF182P17025 639 aaPredicted RBP4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 CDKN1BP46527 198 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 CRYBA4P53673 196 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 HERV-K104P61576 105 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 GAMTQ14353 236 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 TDRG1Q3Y452 100 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 LINC01556Q5JQF7 62 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 OR8I2Q8N0Y5 310 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 RNF182Q8N6D2 247 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 OR52E5Q8NH55 327 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 NPIPB3Q92617 1050 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 C20orf144Q9BQM9 153 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 FXYD6Q9H0Q3 95 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 CDIP1Q9H305 208 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 PRO0255Q9UI72 69 aa4.59□□□□□ -1.67
PDLIM1-203ENST00000490391 IGKV1D-37A0A075B6S9 117 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 K7EQD1 137 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 GPR31O00270 319 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 CASQ2O14958 399 aaPredicted RBP4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 PRAF2O60831 178 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 HSMCR30P0CW71 290 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 HTR2BP41595 481 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 SCAND1P57086 179 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 GNGT1P63211 74 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 FABP5Q01469 135 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 HIST1H1AQ02539 215 aaPredicted RBP4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 ZNF415Q09FC8 603 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 SPHARQ15513 63 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 MORN5Q5VZ52 161 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 DHRS11Q6UWP2 260 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 C11orf72Q8NBR9 251 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 CCDC197Q8NCU1 140 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 OR5AP2Q8NGF4 316 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 OR8A1Q8NGG7 326 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 TMEM37Q8WXS4 190 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 C9orf16Q9BUW7 83 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 MND1Q9BWT6 205 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 SLC25A32Q9H2D1 315 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 PLCXD1Q9NUJ7 323 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 CACNG5Q9UF02 275 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 FUT9Q9Y231 359 aa4.58□□□□□ -1.68
PDLIM1-203ENST00000490391 IGHV3-38A0A0C4DH36 116 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 GYPEP15421 78 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 PSMA1P25786 263 aaKnown RBP4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 KRTAP10-8P60410 259 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 RHOBP62745 196 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 ZNF90Q03938 601 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 OR2F1Q13607 317 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 PSG3Q16557 428 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 PHLDA2Q53GA4 152 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 C2orf83Q53S99 150 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 GFI1BQ5VTD9 330 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 CCDC28AQ8IWP9 274 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 ARRDC1Q8N5I2 433 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 THAP8Q8NA92 274 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 RNASEH2CQ8TDP1 164 aaKnown RBP4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 UFD1Q92890 307 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 ACY3Q96HD9 319 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 ST6GAL2Q96JF0 529 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 ZNF2Q9BSG1 426 aaPredicted RBP4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 RSG1Q9BU20 258 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 HHLA3Q9XRX5 114 aa4.57□□□□□ -1.68
PDLIM1-203ENST00000490391 TRGV1A0A0A0MS02 117 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 TRAV1-2A0A0B4J238 106 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 RBFOX3A6NFN3 312 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 ZNF561-AS1K7EIQ3 104 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 SPINK4O60575 86 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 SRIP30626 198 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 GALR1P47211 349 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 RFX2P48378 723 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 TAS2R20P59543 309 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 LYZP61626 148 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 LAGE3Q14657 143 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 TRAM1Q15629 374 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 AARDQ4LEZ3 155 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 TEPPQ6URK8 271 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 C9orf47Q6ZRZ4 202 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 TBC1D26Q86UD7 250 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 SPARTQ8N0X7 666 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 ZNF738Q8NE65 137 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 ZNF555Q8NEP9 628 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 CYGBQ8WWM9 190 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 PARD6GQ9BYG4 376 aaPredicted RBP4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 CCDC90BQ9GZT6 254 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 EHFQ9NZC4 300 aa4.56□□□□□ -1.68
PDLIM1-203ENST00000490391 A0A0G2JRQ6 117 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 A0A0J9YXV3 536 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 SCGNO76038 276 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 IGHV3-53P01767 116 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 TNFSF8P32971 234 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 TIRAPP58753 221 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 SLAQ13239 276 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 BAALCQ8WXS3 180 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 VGLL1Q99990 258 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 TM2D2Q9BX73 214 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 MRPL32Q9BYC8 188 aaKnown RBP4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 ENY2Q9NPA8 101 aa4.55□□□□□ -1.68
PDLIM1-203ENST00000490391 GSN-AS1Q9NRJ2 163 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms