RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	OR1N2	Q8NGR9	330 aa		13.84	□□□□□ -0.19
SRM-206	ENST00000490101	MED9	Q9NWA0	146 aa		13.84	□□□□□ -0.19
SRM-206	ENST00000490101	RNF24	Q9Y225	148 aa		13.84	□□□□□ -0.19
SRM-206	ENST00000490101	LINC01619	G3V211	115 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101		K7EMT4	169 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	HMGB3	O15347	200 aa	Known RBP	13.83	□□□□□ -0.2
SRM-206	ENST00000490101	CXorf1	O96002	111 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	CCL20	P78556	96 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	PMS2P11	Q13670	270 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	KHDC3L	Q587J8	217 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	UNQ9165/PRO28630	Q6UXU0	137 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	PQLC2	Q6ZP29	291 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	LINC00482	Q8N8I6	264 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	DPF1	Q92782	380 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	PFDN2	Q9UHV9	154 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101		U3KQE9	123 aa		13.83	□□□□□ -0.2
SRM-206	ENST00000490101	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.82	□□□□□ -0.2
SRM-206	ENST00000490101	IGHV3OR16-8	A0A075B7F1	116 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	TRAV5	A0A0B4J249	113 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	NPPC	P23582	126 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	CRYBB3	P26998	211 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	FGF8	P55075	233 aa	Predicted RBP	13.82	□□□□□ -0.2
SRM-206	ENST00000490101	KLF5	Q13887	457 aa	Predicted RBP	13.82	□□□□□ -0.2
SRM-206	ENST00000490101	C8orf86	Q6ZUL3	223 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	STXBP6	Q8NFX7	210 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	METTL26	Q96S19	204 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	C20orf24	Q9BUV8	137 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	SCRT1	Q9BWW7	348 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	SLC25A2	Q9BXI2	301 aa		13.82	□□□□□ -0.2
SRM-206	ENST00000490101	ZNF320	A2RRD8	509 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	ZNF98	A6NK75	572 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	LGALS9	O00182	355 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	ARL14EPL	P0DKL9	152 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	DEFB136	Q30KP8	78 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	IL34	Q6ZMJ4	242 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	OR11H1	Q8NG94	326 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	ZNF503	Q96F45	646 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101	UFC1	Q9Y3C8	167 aa		13.81	□□□□□ -0.2
SRM-206	ENST00000490101		A0A1B0GV50	99 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101	GCHFR	P30047	84 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101	FHL3	Q13643	280 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101	NDUFA5	Q16718	116 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101	LEMD1	Q68G75	181 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101	MARC2	Q969Z3	335 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101	RAX2	Q96IS3	184 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101	DAZ1	Q9NQZ3	744 aa	Known RBP	13.8	□□□□□ -0.2
SRM-206	ENST00000490101	TMEM14C	Q9P0S9	112 aa		13.8	□□□□□ -0.2
SRM-206	ENST00000490101		A8MWP6	167 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	CCL24	O00175	119 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	ZNF207	O43670	478 aa	Known RBP	13.79	□□□□□ -0.2
SRM-206	ENST00000490101	BUB3	O43684	328 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	OR7C2	O60412	319 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	PSMB3	P49720	205 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	C1orf194	Q5T5A4	169 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	SUN5	Q8TC36	379 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	PAXX	Q9BUH6	204 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	GPR61	Q9BZJ8	451 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	OR51M1	Q9H341	326 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	TMPRSS5	Q9H3S3	457 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	TMEM167B	Q9NRX6	74 aa		13.79	□□□□□ -0.2
SRM-206	ENST00000490101	GP9	P14770	177 aa		13.78	□□□□□ -0.2
SRM-206	ENST00000490101	PPT1	P50897	306 aa		13.78	□□□□□ -0.2
SRM-206	ENST00000490101	SLURP1	P55000	103 aa		13.78	□□□□□ -0.2
SRM-206	ENST00000490101	SYNJ2BP	P57105	145 aa		13.78	□□□□□ -0.2
SRM-206	ENST00000490101	EGFEM1P	Q0D2K5	195 aa		13.78	□□□□□ -0.2
SRM-206	ENST00000490101	BPIFA4P	Q86YQ2	179 aa		13.78	□□□□□ -0.2
SRM-206	ENST00000490101	NARS2	Q96I59	477 aa	Known RBP	13.78	□□□□□ -0.2
SRM-206	ENST00000490101	DUX3	Q96PT4	197 aa		13.78	□□□□□ -0.2
SRM-206	ENST00000490101	IGHV7-4-1	A0A0J9YVY3	117 aa		13.77	□□□□□ -0.21
SRM-206	ENST00000490101	RAB19	A4D1S5	217 aa		13.77	□□□□□ -0.21
SRM-206	ENST00000490101	MRPS12	O15235	138 aa	Known RBP	13.77	□□□□□ -0.21
SRM-206	ENST00000490101	APOH	P02749	345 aa	Predicted RBP	13.77	□□□□□ -0.21
SRM-206	ENST00000490101	TM4SF20	Q53R12	229 aa		13.77	□□□□□ -0.21
SRM-206	ENST00000490101	FAM210A	Q96ND0	272 aa		13.77	□□□□□ -0.21
SRM-206	ENST00000490101	GPR82	Q96P67	336 aa		13.77	□□□□□ -0.21
SRM-206	ENST00000490101	SMPX	Q9UHP9	88 aa		13.77	□□□□□ -0.21
SRM-206	ENST00000490101		A0A1W2PS18	150 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	TMEM213	A2RRL7	107 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	IFNA1	P01562	189 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	PYY	P10082	97 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	RPL7	P18124	248 aa	Known RBP	13.76	□□□□□ -0.21
SRM-206	ENST00000490101	MYCNOS	P40205	109 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	UBE2L3	P68036	154 aa	Known RBP	13.76	□□□□□ -0.21
SRM-206	ENST00000490101	C16orf54	Q6UWD8	224 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	COMMD7	Q86VX2	200 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	IQCF2	Q8IXL9	164 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	OR8I2	Q8N0Y5	310 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	FXYD5	Q96DB9	178 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	MANBAL	Q9NQG1	85 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	GNG13	Q9P2W3	67 aa		13.76	□□□□□ -0.21
SRM-206	ENST00000490101	HIST1H1E	P10412	219 aa	Known RBP	13.75	□□□□□ -0.21
SRM-206	ENST00000490101	TAGLN2	P37802	199 aa	Known RBP	13.75	□□□□□ -0.21
SRM-206	ENST00000490101	EIF4E3	Q8N5X7	224 aa	Known RBP	13.75	□□□□□ -0.21
SRM-206	ENST00000490101	DLX4	Q92988	240 aa	Predicted RBP	13.75	□□□□□ -0.21
SRM-206	ENST00000490101	GRAMD2B	Q96HH9	432 aa		13.75	□□□□□ -0.21
SRM-206	ENST00000490101	MCRIP2	Q9BUT9	160 aa	Known RBP	13.75	□□□□□ -0.21
SRM-206	ENST00000490101	TMEM231	Q9H6L2	316 aa		13.75	□□□□□ -0.21
SRM-206	ENST00000490101	IGHV3-49	A0A0A0MS15	119 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	RBFOX3	A6NFN3	312 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	OR10J4	P0C629	311 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms