RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FLNBO75369 2602 aaKnown RBP-0.4□□□□□ -2.47
CCDC93-209ENST00000488908 ITPR3Q14573 2671 aa-0.41□□□□□ -2.47
CCDC93-209ENST00000488908 COL6A3P12111 3177 aa-0.41□□□□□ -2.47
CCDC93-209ENST00000488908 USP9YO00507 2555 aaPredicted RBP-0.41□□□□□ -2.47
CCDC93-209ENST00000488908 MXRA5Q9NR99 2828 aa-0.41□□□□□ -2.47
CCDC93-209ENST00000488908 SCN8AQ9UQD0 1980 aa-0.41□□□□□ -2.47
CCDC93-209ENST00000488908 OBSL1O75147 1896 aa-0.41□□□□□ -2.47
CCDC93-209ENST00000488908 CACNA1HO95180 2353 aa-0.41□□□□□ -2.47
CCDC93-209ENST00000488908 ODAMA1E959 279 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 C17orf112F2Z3M2 114 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 TNNC2P02585 160 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 SERPINE1P05121 402 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 PPIBP23284 216 aaKnown RBP-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 ROMO1P60602 79 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 CDK6Q00534 326 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 SPINK13Q1W4C9 94 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 C8orf74Q6P047 294 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 OR5AS1Q8N127 324 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 OR10K1Q8NGX5 313 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 MUCL1Q96DR8 90 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 RMND5BQ96G75 393 aaPredicted RBP-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 ATP6V1G3Q96LB4 118 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 CCL19Q99731 98 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 MRPL27Q9P0M9 148 aaKnown RBP-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 OR52A1Q9UKL2 312 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 APC2O95996 2303 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 WRNQ14191 1432 aaPredicted RBP eCLIP-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 ANK2Q01484 3957 aa-0.41□□□□□ -2.48
CCDC93-209ENST00000488908 HYDINQ4G0P3 5121 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 KDM6BO15054 1643 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 USP9XQ93008 2570 aaPredicted RBP-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 PTPN13Q12923 2485 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 ARHGEF11O15085 1522 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 OR7C1O76099 320 aaPredicted RBP-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 TTRP02766 147 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 CALB1P05937 261 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 SULT1A1P50225 295 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 MYL5Q02045 173 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 OR2F1Q13607 317 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 LYRM7Q5U5X0 104 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 PDZD9Q8IXQ8 264 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 Q8TAT8 98 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 CT55Q8WUE5 264 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 CMSS1Q9BQ75 279 aaKnown RBP-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 SLC25A21Q9BQT8 299 aaPredicted RBP-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 LPAR5Q9H1C0 372 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 TMEM133Q9H2Q1 129 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 TVP23BQ9NYZ1 205 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 OPTCQ9UBM4 332 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 PKIGQ9Y2B9 76 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 NOSIPQ9Y314 301 aaKnown RBP-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 BCORL1Q5H9F3 1711 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 HSPG2P98160 4391 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 HECTD1Q9ULT8 2610 aa-0.42□□□□□ -2.48
CCDC93-209ENST00000488908 WNK2Q9Y3S1 2297 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 STARD9Q9P2P6 4700 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 RFX7Q2KHR2 1363 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 PIEZO2Q9H5I5 2752 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 NDUFB3O43676 98 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 OR10J4P0C629 311 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 HIST1H1EP10412 219 aaKnown RBP-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 RNASE4P34096 147 aaKnown RBP-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 DEFA1P59665 94 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 VBP1P61758 197 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 EIF3IQ13347 325 aaKnown RBP-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 KRR1Q13601 381 aaKnown RBP-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 OCIAD2Q56VL3 154 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 CCDC122Q5T0U0 273 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 C22orf39Q6P5X5 142 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 Q6Q795 121 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 ANGPTL5Q86XS5 388 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 C12orf45Q8N5I9 185 aaPredicted RBP-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 PTH2Q96A98 100 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 BORCS7Q96B45 105 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 TMEM126AQ9H061 195 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 POLQO75417 2590 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 EPPK1P58107 5090 aaKnown RBP-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 PTPRQQ9UMZ3 2332 aa-0.43□□□□□ -2.48
CCDC93-209ENST00000488908 CHD6Q8TD26 2715 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 ROBO3Q96MS0 1386 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 CELSR2Q9HCU4 2923 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 SONP18583 2426 aaKnown RBP-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 HECW1Q76N89 1606 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 hCG_1818297A0A087WSY0 165 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 TRAV27A0A087WT01 109 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 A8MT66 165 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 M0R233 179 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 TGOLN2O43493 480 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 C8GP07360 202 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 CAV3P56539 151 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 MAGOHP61326 146 aaKnown RBP-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 RANP62826 216 aaKnown RBP-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 IAH1Q2TAA2 248 aaPredicted RBP-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 LINC00299Q6ZSB3 139 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 C10orf111Q8N326 155 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 RAB37Q96AX2 223 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 PROK2Q9HC23 129 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 VPS29Q9UBQ0 182 aa-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 EP300Q09472 2414 aaPredicted RBP-0.44□□□□□ -2.48
CCDC93-209ENST00000488908 WDR87Q6ZQQ6 2873 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms