RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TMEM70Q9BUB7 260 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 MAP1LC3CQ9BXW4 147 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 TMEM191AQ9H0A3 160 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 ZNF286AQ9HBT8 521 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 SPANXB1Q9NS25 103 aaPredicted RBP2.58□□□□□ -2
ECHDC1-217ENST00000488087 SLC39A9Q9NUM3 307 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 ANXA10Q9UJ72 324 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 ZNF257Q9Y2Q1 563 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 UFC1Q9Y3C8 167 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 SPCS1Q9Y6A9 102 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 LINC00312Q9Y6C7 94 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 KCNE3Q9Y6H6 103 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 PTPRDP23468 1912 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 DENND4CQ5VZ89 1909 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 ANAPC1Q9H1A4 1944 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 PLXNB3Q9ULL4 1909 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 PLXND1Q9Y4D7 1925 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 A0A1B0GV50 99 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 LOC107986453A0A1B0GWG9 222 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 GRIFINA4D1Z8 144 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 H7C1C5 153 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 RER1O15258 196 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 XRCC2O43543 280 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 IGHMP01871 453 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 ASAH2BP0C7U1 165 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 HIST1H1EP10412 219 aaKnown RBP2.57□□□□□ -2
ECHDC1-217ENST00000488087 CCL1P22362 96 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 NPPCP23582 126 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 HTR1DP28221 377 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 VDAC2P45880 294 aaPredicted RBP2.57□□□□□ -2
ECHDC1-217ENST00000488087 TCTAP57738 103 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 RHOAP61586 193 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 HBG1P69891 147 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 HBG2P69892 147 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 PSG4Q00888 419 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 ZNF90Q03938 601 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 TNXAQ16473 311 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 MRPL2Q5T653 305 aaKnown RBP2.57□□□□□ -2
ECHDC1-217ENST00000488087 TMEM78Q5T7P6 136 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 EBLN2Q6P2I7 272 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 C2orf91Q6ZV80 131 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 LYZL2Q7Z4W2 148 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 APRG1Q8IVJ8 170 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 CA13Q8N1Q1 262 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 C6orf223Q8N319 242 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 ZADH2Q8N4Q0 377 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 CDRT4Q8N9R6 151 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 C20orf203Q8NBC4 194 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 OR2M3Q8NG83 312 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 OR10D3Q8NH80 312 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 OR9G1Q8NH87 305 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 ADTRPQ96IZ2 230 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 NRTNQ99748 197 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 NDFIP1Q9BT67 221 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 TMEM59Q9BXS4 323 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 PECRQ9BY49 303 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 HES7Q9BYE0 225 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 TTTY10Q9BZA0 68 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 TMEM222Q9H0R3 208 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 OSTCQ9NRP0 149 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.57□□□□□ -2
ECHDC1-217ENST00000488087 NECAP2Q9NVZ3 263 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 SS18L2Q9UHA2 77 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 PRO0461Q9UI25 63 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 VPREB3Q9UKI3 123 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 SIGLEC9Q9Y336 463 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 CCDC88CQ9P219 2028 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 GTF3C1Q12789 2109 aa2.57□□□□□ -2
ECHDC1-217ENST00000488087 DOCK6Q96HP0 2047 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 MDC1Q14676 2089 aaKnown RBP2.56□□□□□ -2
ECHDC1-217ENST00000488087 NINQ8N4C6 2090 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 LOC102724200A0A096LPH7 203 aaPredicted RBP2.56□□□□□ -2
ECHDC1-217ENST00000488087 TRGV10A0A0A0MS01 117 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 IGLV1-36A0A0B4J1U3 117 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 C3orf85A0A1B0GTC6 90 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 SPAARA0A1B0GVQ0 90 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 A0A1W2PRD5 423 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 A0A1W2PRF3 423 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 A0A1W2PRM7 423 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 OR4C46A6NHA9 309 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 C11orf94C9JXX5 98 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 TMEM262E9PQX1 116 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 SYS1-DBNDD2H3BUS1 97 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 M0QXV9 152 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 ISLRO14498 428 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 SOCS1O15524 211 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 ERI3O43414 337 aaKnown RBP2.56□□□□□ -2
ECHDC1-217ENST00000488087 APCSP02743 223 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 TTRP02766 147 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 HIST1H1TP22492 207 aaPredicted RBP2.56□□□□□ -2
ECHDC1-217ENST00000488087 EVI2AP22794 236 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 CBLN1P23435 193 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 BLVRBP30043 206 aaPredicted RBP2.56□□□□□ -2
ECHDC1-217ENST00000488087 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
ECHDC1-217ENST00000488087 GNG3P63215 75 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 SLC35B1P78383 322 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 DAZ2Q13117 558 aaKnown RBP2.56□□□□□ -2
ECHDC1-217ENST00000488087 ABCA11PQ4W5N1 156 aa2.56□□□□□ -2
ECHDC1-217ENST00000488087 LINC01545Q5VT33 79 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms