RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 MBD3L1Q8WWY6 194 aa8.43□□□□□ -1.06
HDLBP-242ENST00000488013 DLX4Q92988 240 aaPredicted RBP8.43□□□□□ -1.06
HDLBP-242ENST00000488013 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
HDLBP-242ENST00000488013 GPR61Q9BZJ8 451 aa8.43□□□□□ -1.06
HDLBP-242ENST00000488013 VSIRQ9H7M9 311 aa8.43□□□□□ -1.06
HDLBP-242ENST00000488013 SEPSECSQ9HD40 501 aaKnown RBP8.43□□□□□ -1.06
HDLBP-242ENST00000488013 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
HDLBP-242ENST00000488013 SMPXQ9UHP9 88 aa8.43□□□□□ -1.06
HDLBP-242ENST00000488013 TMEM213A2RRL7 107 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 CBLN1P23435 193 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 TAGLN2P37802 199 aaKnown RBP8.42□□□□□ -1.06
HDLBP-242ENST00000488013 GUK1Q16774 197 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 TM4SF20Q53R12 229 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 GCSAMLQ5JQS6 135 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 SFT2D1Q8WV19 159 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 RHPN1-AS1Q9BWJ2 59 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 TMEM167BQ9NRX6 74 aa8.42□□□□□ -1.06
HDLBP-242ENST00000488013 TRAV25A0A0B4J276 109 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 MAP1LC3B2A6NCE7 125 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 RGS13O14921 159 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 STAG3L2P0CL84 134 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 STAG3L3P0CL85 134 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 FOLR2P14207 255 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 PSMB3P49720 205 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 C16orf54Q6UWD8 224 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 LINC00482Q8N8I6 264 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 WFDC9Q8NEX5 89 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 OR2K2Q8NGT1 345 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 DYNLRB2Q8TF09 96 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 ZNF414Q96IQ9 312 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 DUX3Q96PT4 197 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 UHRF2Q96PU4 802 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 MAP1LC3BQ9GZQ8 125 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 CLEC5AQ9NY25 188 aa8.41□□□□□ -1.06
HDLBP-242ENST00000488013 CHEK1O14757 476 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 OR7C2O60412 319 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 HIST1H1EP10412 219 aaKnown RBP8.4□□□□□ -1.06
HDLBP-242ENST00000488013 PAFAH1B2P68402 229 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 PMS2P11Q13670 270 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 PDE6HQ13956 83 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 FAM74A1Q5RGS3 127 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 IL34Q6ZMJ4 242 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 MIR17HGQ75NE6 70 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 PAXXQ9BUH6 204 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 SCRT1Q9BWW7 348 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.06
HDLBP-242ENST00000488013 OR51M1Q9H341 326 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 HRH4Q9H3N8 390 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 SLC25A22Q9H936 323 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 ZMAT5Q9UDW3 170 aaKnown RBP8.4□□□□□ -1.06
HDLBP-242ENST00000488013 RFNGQ9Y644 331 aa8.4□□□□□ -1.06
HDLBP-242ENST00000488013 IGHV3OR16-8A0A075B7F1 116 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 ZNF785A8K8V0 405 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 ZNF207O43670 478 aaKnown RBP8.39□□□□□ -1.07
HDLBP-242ENST00000488013 ZNF253O75346 499 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 CSN3P07498 182 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 ATF4P18848 351 aaPredicted RBP8.39□□□□□ -1.07
HDLBP-242ENST00000488013 LCN15Q6UWW0 184 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 RBPMS2Q6ZRY4 209 aaKnown RBP8.39□□□□□ -1.07
HDLBP-242ENST00000488013 SPATA3Q8NHX4 192 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 GLMPQ8WWB7 406 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 FAM167A-AS1Q96KT0 104 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
HDLBP-242ENST00000488013 COL6A5A8TX70 2615 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 A0A087X0K7 114 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 IFNA1P01562 189 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 CD33P20138 364 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 FHITP49789 147 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 RPL11P62913 178 aaKnown RBP8.38□□□□□ -1.07
HDLBP-242ENST00000488013 UBE2L3P68036 154 aaKnown RBP8.38□□□□□ -1.07
HDLBP-242ENST00000488013 IFITM2Q01629 132 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 ZNF726P1Q15940 193 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 CLLU1Q5K131 121 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 C9orf66Q5T8R8 295 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 LYPD1Q8N2G4 141 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 TXNDC17Q9BRA2 123 aa8.38□□□□□ -1.07
HDLBP-242ENST00000488013 SAP30O75446 220 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 NMBP08949 121 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 NBEAP1P0C6P0 100 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 ARL14EPLP0DKL9 152 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 IGLC2P0DOY2 106 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 GP9P14770 177 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 GCHFRP30047 84 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 ID1P41134 155 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-242ENST00000488013 PSG9Q00887 426 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 DEFB114Q30KQ6 69 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 PRR31Q5SQ13 230 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 SPATA31B1PQ5VZV4 182 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 LCN12Q6JVE5 192 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 TCF24Q7RTU0 167 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 LYPD6BQ8NI32 183 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 MDFIQ99750 246 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 TCEAL7Q9BRU2 100 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 SLC50A1Q9BRV3 221 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms