RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 DEFA6Q01524 100 aa13.37□□□□□ -0.27
CPNE1-224ENST00000483359 DNASE2O00115 360 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-224ENST00000483359 BCL2L11O43521 198 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 CD81P60033 236 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 LGALSLQ3ZCW2 172 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-224ENST00000483359 TMUB2Q71RG4 321 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 TRAV5A0A0B4J249 113 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 JTBO76095 146 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 S100A7P31151 101 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 FAM78BQ5VT40 261 aa13.36□□□□□ -0.27
CPNE1-224ENST00000483359 ZNF471Q9BX82 626 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-224ENST00000483359 SEPSECSQ9HD40 501 aaKnown RBP13.36□□□□□ -0.27
CPNE1-224ENST00000483359 CD5P06127 495 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 SNRPCP09234 159 aaKnown RBP13.35□□□□□ -0.27
CPNE1-224ENST00000483359 NKX2-5P52952 324 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-224ENST00000483359 PAFAH1B2P68402 229 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 SPATA31B1PQ5VZV4 182 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 S100A7AQ86SG5 101 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 GATAD1Q8WUU5 269 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 WFDC10AQ9H1F0 79 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 UBQLN2Q9UHD9 624 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 TIMM9Q9Y5J7 89 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 FBN3Q75N90 2809 aa13.35□□□□□ -0.27
CPNE1-224ENST00000483359 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
CPNE1-224ENST00000483359 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPNE1-224ENST00000483359 RAB2AP61019 212 aa13.34□□□□□ -0.27
CPNE1-224ENST00000483359 FAM24BQ8N5W8 94 aa13.34□□□□□ -0.27
CPNE1-224ENST00000483359 GALR1P47211 349 aa13.33□□□□□ -0.28
CPNE1-224ENST00000483359 MIR17HGQ75NE6 70 aa13.33□□□□□ -0.28
CPNE1-224ENST00000483359 PSMG3Q9BT73 122 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-224ENST00000483359 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
CPNE1-224ENST00000483359 SMAD5-AS1Q9Y6J3 95 aa13.33□□□□□ -0.28
CPNE1-224ENST00000483359 K7EIL1 84 aa13.32□□□□□ -0.28
CPNE1-224ENST00000483359 RPL7P18124 248 aaKnown RBP13.32□□□□□ -0.28
CPNE1-224ENST00000483359 C9orf62Q8N4C0 152 aa13.32□□□□□ -0.28
CPNE1-224ENST00000483359 OR2G3Q8NGZ4 309 aa13.32□□□□□ -0.28
CPNE1-224ENST00000483359 DCANP1Q8TF63 244 aa13.32□□□□□ -0.28
CPNE1-224ENST00000483359 GNPNAT1Q96EK6 184 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-224ENST00000483359 ACOT6Q3I5F7 207 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-224ENST00000483359 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-224ENST00000483359 M6PRP20645 277 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 FAM122CQ6P4D5 195 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 GPR82Q96P67 336 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 H3BTX0 84 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 K7EQG2 157 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 ZNF688P0C7X2 276 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 ODF3L2Q3SX64 289 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 BPIFA4PQ86YQ2 179 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 Q8N1Y9 231 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 OR10G4Q8NGN3 311 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 OR10G9Q8NGN4 311 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 OR10G7Q8NGN6 311 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 FUT9Q9Y231 359 aa13.31□□□□□ -0.28
CPNE1-224ENST00000483359 ZNF124Q15973 351 aa13.3□□□□□ -0.28
CPNE1-224ENST00000483359 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.3□□□□□ -0.28
CPNE1-224ENST00000483359 DEFB125Q8N687 156 aa13.3□□□□□ -0.28
CPNE1-224ENST00000483359 MRAPQ8TCY5 172 aa13.3□□□□□ -0.28
CPNE1-224ENST00000483359 C17orf77Q96MU5 243 aa13.3□□□□□ -0.28
CPNE1-224ENST00000483359 SLC25A2Q9BXI2 301 aa13.3□□□□□ -0.28
CPNE1-224ENST00000483359 MRPL32Q9BYC8 188 aaKnown RBP13.3□□□□□ -0.28
CPNE1-224ENST00000483359 RNF24Q9Y225 148 aa13.3□□□□□ -0.28
CPNE1-224ENST00000483359 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
CPNE1-224ENST00000483359 MRPS12O15235 138 aaKnown RBP13.29□□□□□ -0.28
CPNE1-224ENST00000483359 HMGB3O15347 200 aaKnown RBP13.29□□□□□ -0.28
CPNE1-224ENST00000483359 PYYP10082 97 aa13.29□□□□□ -0.28
CPNE1-224ENST00000483359 RHOBP62745 196 aa13.29□□□□□ -0.28
CPNE1-224ENST00000483359 SERF2P84101 59 aa13.29□□□□□ -0.28
CPNE1-224ENST00000483359 DEFB121Q5J5C9 76 aa13.29□□□□□ -0.28
CPNE1-224ENST00000483359 APRG1Q8IVJ8 170 aa13.29□□□□□ -0.28
CPNE1-224ENST00000483359 MAP6D1Q9H9H5 199 aa13.29□□□□□ -0.28
CPNE1-224ENST00000483359 A0A1W2PPV4 95 aa13.28□□□□□ -0.28
CPNE1-224ENST00000483359 SPP1P10451 314 aa13.28□□□□□ -0.28
CPNE1-224ENST00000483359 TPT1P13693 172 aaKnown RBP13.28□□□□□ -0.28
CPNE1-224ENST00000483359 DEFB131AP59861 70 aa13.28□□□□□ -0.28
CPNE1-224ENST00000483359 IGFL4Q6B9Z1 124 aa13.28□□□□□ -0.28
CPNE1-224ENST00000483359 C19orf73Q9NVV2 129 aa13.28□□□□□ -0.28
CPNE1-224ENST00000483359 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.28
CPNE1-224ENST00000483359 OR7C2O60412 319 aa13.27□□□□□ -0.28
CPNE1-224ENST00000483359 ATP6V1G1O75348 118 aa13.27□□□□□ -0.28
CPNE1-224ENST00000483359 TMEM41BQ5BJD5 291 aa13.27□□□□□ -0.28
CPNE1-224ENST00000483359 PSMG4Q5JS54 123 aa13.27□□□□□ -0.28
CPNE1-224ENST00000483359 RPP25LQ8N5L8 163 aaKnown RBP13.27□□□□□ -0.28
CPNE1-224ENST00000483359 FAM167A-AS1Q96KT0 104 aa13.27□□□□□ -0.28
CPNE1-224ENST00000483359 C16orf92Q96LL3 132 aa13.27□□□□□ -0.28
CPNE1-224ENST00000483359 H3BQ15 152 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 SOCS3O14543 225 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 OR10J4P0C629 311 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 IGLC2P0DOY2 106 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 IGHV4-30-4P0DP06 118 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 CDC34P49427 236 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-224ENST00000483359 AKR1C8PQ5T2L2 129 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 BAP18Q8IXM2 172 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 LINC00052Q96N35 136 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 RPRMQ9NS64 109 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
CPNE1-224ENST00000483359 BOLA2-SMG1P6H3BVE0 249 aa13.26□□□□□ -0.29
CPNE1-224ENST00000483359 MBP02144 154 aa13.26□□□□□ -0.29
CPNE1-224ENST00000483359 SNRPD3P62318 126 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms