RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 C2CD3Q4AC94 2353 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 GZMBP10144 247 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 CNTFRP26992 372 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 TMEM160Q9NX00 188 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 TLN2Q9Y4G6 2542 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 C14orf144Q96I85 54 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 PARD6GQ9BYG4 376 aaPredicted RBP11.49□□□□□ -0.57
NPHP4-208ENST00000478423 H7C1H1 209 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 PPP1R17O96001 155 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 GRNP28799 593 aaKnown RBP11.49□□□□□ -0.57
NPHP4-208ENST00000478423 C11orf53Q8IXP5 236 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 LINC01587Q99440 93 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 TRAV21A0A0B4J279 112 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 FNDC10F2Z333 226 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 NDPQ00604 133 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 FAM90A2PQ658T7 463 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 IGF2-ASQ6U949 168 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 A6NNC1 897 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 PAX1P15863 534 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 FOXL1Q12952 345 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 WFDC12Q8WWY7 111 aa11.49□□□□□ -0.57
NPHP4-208ENST00000478423 SPTBN4Q9H254 2564 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 NAV3Q8IVL0 2385 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 LYPD6Q86Y78 171 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 SSC4DQ8WTU2 575 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 PRDM13Q9H4Q3 707 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 NDUFA4L2Q9NRX3 87 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 IGKV3OR2-268A0A0C4DH90 116 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 GNB1LQ9BYB4 327 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 OR11H12B2RN74 326 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 CRXO43186 299 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-208ENST00000478423 UBE2E1P51965 193 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 OR11H1Q8NG94 326 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 OR11H2Q8NH07 326 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 CYYR1Q96J86 154 aa11.48□□□□□ -0.57
NPHP4-208ENST00000478423 SLC25A16P16260 332 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 ZNF833PQ6ZTB9 187 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 MAPK1IP1LQ8NDC0 245 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 GEMIN7Q9H840 131 aaKnown RBP11.47□□□□□ -0.57
NPHP4-208ENST00000478423 TMEM8BA6NDV4 472 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 ATP5LO75964 103 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 MSMBP08118 114 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 ZNF256Q9Y2P7 627 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-208ENST00000478423 NDUFS7O75251 213 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 WISP2O76076 250 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 TMEM170BQ5T4T1 132 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 RUSC1-AS1Q66K80 236 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 SP5Q6BEB4 398 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-208ENST00000478423 Q8TAT8 98 aa11.47□□□□□ -0.57
NPHP4-208ENST00000478423 ZNF688P0C7X2 276 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 DIAPH2-AS1Q14236 149 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 RAB37Q96AX2 223 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 SCGB3A1Q96QR1 104 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 TMEM238LA0A1B0GVL6 79 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 A6NJY4 79 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 NDUFS8O00217 210 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 CTAG1AP78358 180 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 IL15RAQ13261 267 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 GFI1BQ5VTD9 330 aa11.46□□□□□ -0.57
NPHP4-208ENST00000478423 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.58
NPHP4-208ENST00000478423 LINC00311Q8N616 119 aa11.46□□□□□ -0.58
NPHP4-208ENST00000478423 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.58
NPHP4-208ENST00000478423 TRBV7-1A0A0A6YYK4 115 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 RNF223E7ERA6 249 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 OVOL1O14753 267 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 WT1-ASQ06250 92 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 PRR31Q5SQ13 230 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
NPHP4-208ENST00000478423 GSN-AS1Q9NRJ2 163 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 H7C2G1 150 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 SNAI2O43623 268 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 LINC00614P0C842 121 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 FOXC2Q99958 501 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 KAAG1Q9UBP8 84 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
NPHP4-208ENST00000478423 JMJD8Q96S16 334 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 HIST1H2BLQ99880 126 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 LOC107984156A0A0G2JMH3 177 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 EMP1P54849 157 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 Q6ZSR3 168 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 ARL17AQ8IVW1 177 aa11.45□□□□□ -0.58
NPHP4-208ENST00000478423 CHD8Q9HCK8 2581 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 SRRM4A7MD48 611 aaKnown RBP11.44□□□□□ -0.58
NPHP4-208ENST00000478423 H3BVH4 76 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 MED12LQ86YW9 2145 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 ATP6V0E1O15342 81 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms