RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF727A8MUV8 499 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 ZNF670-ZNF695F2Z2N8 137 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 J3QR89 54 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 SLC22A1O15245 554 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 CREBL2O60519 120 aaPredicted RBP1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 CLPSP04118 112 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 SHBGP04278 402 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 TCRAP04437 139 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 CRYGSP22914 178 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 FOXA3P55318 350 aaPredicted RBP1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 QRFPP83859 136 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 HES1Q14469 280 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 TAF9Q16594 264 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 ZNF181Q2M3W8 571 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 CCSMST1Q4G0I0 132 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 HSD17B12Q53GQ0 312 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 KHDC3LQ587J8 217 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 RNASE10Q5GAN6 216 aaKnown RBP1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 EIF5AL1Q6IS14 154 aaKnown RBP1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 SCIMPQ6UWF3 145 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 TMEM136Q6ZRR5 245 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 C7orf65Q6ZTY9 151 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 ZNF418Q8TF45 676 aaPredicted RBP1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 MINOS1-NBL1R4GNA1 71 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 FAM135AQ9P2D6 1515 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 RIMBP3CA6NJZ7 1639 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 RIMBP3BA6NNM3 1639 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 NUP210LQ5VU65 1888 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 RIMBP3Q9UFD9 1639 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 ECM29Q5VYK3 1845 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 SPEF2Q9C093 1822 aa1.94□□□□□ -2.1
SMARCA1-204ENST00000478420 FAM135BQ49AJ0 1406 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 TRGV5A0A0B4J1U4 118 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 LOC100130705A0A1B0GUX0 176 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 F6UZH7 168 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 TP53I11O14683 189 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 RER1O15258 196 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 GNRH2O43555 120 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 NCR2O95944 276 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 TCL1BO95988 128 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 SLC25A5P05141 298 aaKnown RBP1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 METTL15P1P0C7V9 234 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 CRYGAP11844 174 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 AKR1D1P51857 326 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 FAM27BQ5VT28 67 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 BRD3OSQ6XYD6 125 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 MORN4Q8NDC4 146 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 WFDC11Q8NEX6 87 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 OR5D16Q8NGK9 328 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 OR5H6Q8NGV6 325 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 AQP3Q92482 292 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 PRELID3AQ96N28 172 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 ZNF714Q96N38 554 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 OR8B2Q96RD0 313 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 TXNL4BQ9NX01 149 aaKnown RBP1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 PHLPP1O60346 1717 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 SCN4AP35499 1836 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 MBD5Q9P267 1494 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 EIF4G3O43432 1585 aaKnown RBP1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
SMARCA1-204ENST00000478420 NALCNQ8IZF0 1738 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 C7orf71A4D174 169 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 MT-ND6P03923 174 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 NFYAP23511 347 aaPredicted RBP1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 RBP2P50120 134 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 MMGT1Q8N4V1 131 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 DIRC1Q969H9 104 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 MAGOHBQ96A72 148 aaKnown RBP1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 MRPS24Q96EL2 167 aaKnown RBP1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 SDF2Q99470 211 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 BCL2L10Q9HD36 194 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 TIMM9Q9Y5J7 89 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 HIVEP2P31629 2446 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 GRIN2AQ12879 1464 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 BCL9LQ86UU0 1499 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 FRMPD1Q5SYB0 1578 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 PIK3C2AO00443 1686 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 FER1L6Q2WGJ9 1857 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 SHANK1Q9Y566 2161 aa1.92□□□□□ -2.1
SMARCA1-204ENST00000478420 RIC1Q4ADV7 1423 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 TRPM1Q7Z4N2 1603 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 ARHGEF28Q8N1W1 1705 aaKnown RBP1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 SHROOM3Q8TF72 1996 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 ANKRD31Q8N7Z5 1873 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 N4BP2Q86UW6 1770 aaPredicted RBP1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 TMEM2Q9UHN6 1383 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 TRAV27A0A087WT01 109 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 IGKV2-24A0A0C4DH68 120 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 A0A0D9SG52 128 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 TRBV10-2A0A0K0K1G8 114 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 A0A1B0GVG6 124 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 SPAARA0A1B0GVQ0 90 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 OR2T8A6NH00 312 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 A8MWV9 139 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 H7C2G1 150 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 CORTO00230 105 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 TIMM17BO60830 172 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 IFNA4P05014 189 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 COX6A1P12074 109 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms