RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 HIST1H2BLQ99880 126 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 TTTY13Q9BZ97 58 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 LPAR5Q9H1C0 372 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 CBLN4Q9NTU7 201 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 EPDR1Q9UM22 224 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 DOCK6Q96HP0 2047 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 STRCQ7RTU9 1775 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 TNS3Q68CZ2 1445 aa1.82□□□□□ -2.12
SMNDC1-205ENST00000477763 DICER1Q9UPY3 1922 aaKnown RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 CUX1P39880 1505 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 FAM135AQ9P2D6 1515 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 ABCC8Q09428 1581 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 DNMBPQ6XZF7 1577 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 RIMS1Q86UR5 1692 aaKnown RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 ODAMA1E959 279 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 TXNDC9O14530 226 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 NAPSAO96009 420 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 GPX1P07203 203 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 PAEPP09466 180 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 ZNF25P17030 456 aaPredicted RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 RPL35P42766 123 aaKnown RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 XCL1P47992 114 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 HINT1P49773 126 aaPredicted RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 RAB5CP51148 216 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 HBBP68871 147 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 NEDD8Q15843 81 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 RNASE10Q5GAN6 216 aaKnown RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 C4orf22Q6V702 233 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 C2orf91Q6ZV80 131 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 BPIFA4PQ86YQ2 179 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 PDZD9Q8IXQ8 264 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 DYNAPQ8N1N2 210 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 MMGT1Q8N4V1 131 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 PFN4Q8NHR9 129 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 Q9BRP9 147 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 ADAT1Q9BUB4 502 aaKnown RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 NDUFB11Q9NX14 153 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 GNG8Q9UK08 70 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 BAIAP2Q9UQB8 552 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 IBTKQ9P2D0 1353 aaPredicted RBP1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 DOCK3Q8IZD9 2030 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 BAHCC1Q9P281 2608 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 MAPKBP1O60336 1514 aa1.81□□□□□ -2.12
SMNDC1-205ENST00000477763 KIF21BO75037 1637 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 CACNA1SQ13698 1873 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 TRAV13-1A0A0B4J241 112 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 TRBV27A0A0K0K1C4 114 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 A0A1W2PQD3 144 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 H3BMG7 143 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 GNG7O60262 68 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 HIST1H2BKO60814 126 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 TCL1BO95988 128 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 MT-ND4LP03901 98 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 HIST1H2BJP06899 126 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 MSMBP08118 114 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 CXCL1P09341 107 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 METTL15P1P0C7V9 234 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 FABP2P12104 132 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 NFYAP23511 347 aaPredicted RBP1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 ARPP19P56211 112 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 COPZ1P61923 177 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 MRPS10P82664 201 aaKnown RBP1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 QRFPP83859 136 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 RHOGP84095 191 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 KISS1Q15726 138 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 C3orf62Q6ZUJ4 267 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 CTAGE3PQ8IX95 158 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 SIGLECL1Q8N7X8 197 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 OR5A2Q8NGI9 324 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 NAT14Q8WUY8 206 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 FGF13Q92913 245 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 COA4Q9NYJ1 87 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 ADGRB3O60242 1522 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 ABCC2Q92887 1545 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 MED1Q15648 1581 aaPredicted RBP1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 ADAMTS7Q9UKP4 1686 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 TAF1LQ8IZX4 1826 aa1.8□□□□□ -2.12
SMNDC1-205ENST00000477763 C7orf71A4D174 169 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 C11orf86A6NJI1 115 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 SLC22A1O15245 554 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 GNRH2O43555 120 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 NDUFB3O43676 98 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 CREBL2O60519 120 aaPredicted RBP1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 IFNA4P05014 189 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 IGLC6P0CF74 106 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 LINC00694P0DN24 101 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 HLA-EP13747 358 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 CRYGSP22914 178 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 MYL5Q02045 173 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 OCIAD2Q56VL3 154 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 EIF5AL1Q6IS14 154 aaKnown RBP1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 DEFB132Q7Z7B7 95 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 OR5D16Q8NGK9 328 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 ZNF418Q8TF45 676 aaPredicted RBP1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 ZC2HC1AQ96GY0 325 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 C14orf144Q96I85 54 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 PDCD10Q9BUL8 212 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 NPCDR1Q9BY65 106 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms