RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 OR4D10Q8NGI6 311 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 DTD1Q8TEA8 209 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 TRGV9Q99603 122 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 SLC45A2Q9UMX9 530 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 ZNF98A6NK75 572 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 ADAP1O75689 374 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 TNFAIP8O95379 198 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 SMR3BP02814 79 aaPredicted RBP13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 HTN1P15515 57 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 SCGB2B2Q4G0G5 96 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 IGFL4Q6B9Z1 124 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 Q6ZSN1 163 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 OR4D5Q8NGN0 318 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 HSPB7Q9UBY9 170 aa13.89□□□□□ -0.19
PDLIM1-202ENST00000477757 IGKV1OR2-108A0A075B7D4 117 aa13.88□□□□□ -0.19
PDLIM1-202ENST00000477757 FAM229AH3BQW9 127 aa13.88□□□□□ -0.19
PDLIM1-202ENST00000477757 IFNA5P01569 189 aa13.88□□□□□ -0.19
PDLIM1-202ENST00000477757 ATP5IP56385 69 aaPredicted RBP13.88□□□□□ -0.19
PDLIM1-202ENST00000477757 OR1B1Q8NGR6 318 aa13.88□□□□□ -0.19
PDLIM1-202ENST00000477757 GPR82Q96P67 336 aa13.88□□□□□ -0.19
PDLIM1-202ENST00000477757 CFDP00746 253 aaPredicted RBP13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 THAP8Q8NA92 274 aa13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 ZNF738Q8NE65 137 aa13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 OR52I2Q8NH67 350 aa13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 RTBDNQ9BSG5 229 aaPredicted RBP13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 MTFP1Q9UDX5 166 aa13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 C14orf166Q9Y224 244 aaKnown RBP13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
PDLIM1-202ENST00000477757 DNAH10OSP0CZ25 163 aa13.86□□□□□ -0.19
PDLIM1-202ENST00000477757 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
PDLIM1-202ENST00000477757 HIST1H1AQ02539 215 aaPredicted RBP13.86□□□□□ -0.19
PDLIM1-202ENST00000477757 RBKSQ9H477 322 aa13.86□□□□□ -0.19
PDLIM1-202ENST00000477757 CRYM-AS1A6NIL9 109 aa13.85□□□□□ -0.19
PDLIM1-202ENST00000477757 SIVA1O15304 175 aa13.85□□□□□ -0.19
PDLIM1-202ENST00000477757 RHOBP62745 196 aa13.85□□□□□ -0.19
PDLIM1-202ENST00000477757 GPR107Q5VW38 600 aa13.85□□□□□ -0.19
PDLIM1-202ENST00000477757 OR8A1Q8NGG7 326 aa13.85□□□□□ -0.19
PDLIM1-202ENST00000477757 IL22RA2Q969J5 263 aa13.85□□□□□ -0.19
PDLIM1-202ENST00000477757 A0A087WTM6 91 aa13.84□□□□□ -0.19
PDLIM1-202ENST00000477757 HPGDSO60760 199 aa13.84□□□□□ -0.19
PDLIM1-202ENST00000477757 GGNBP1Q5YKI7 109 aa13.84□□□□□ -0.19
PDLIM1-202ENST00000477757 PPP1R14DQ9NXH3 145 aa13.84□□□□□ -0.19
PDLIM1-202ENST00000477757 A0A096LPF7 62 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 GAGE12BA1L429 117 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 H7BYZ3 331 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 GAGE7O76087 117 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 RAB3DO95716 219 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 RLN2P04090 185 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 GAGE12FP0CL80 117 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 GAGE12GP0CL81 117 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 GAGE12IP0CL82 117 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 CDKN1BP46527 198 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 CCR6P51684 374 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 TAS2R19P59542 299 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 SMCO1Q147U7 214 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 SURF2Q15527 256 aaPredicted RBP13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 TMEM229BQ8NBD8 167 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 Q9H521 79 aa13.83□□□□□ -0.2
PDLIM1-202ENST00000477757 FGL1Q08830 312 aa13.82□□□□□ -0.2
PDLIM1-202ENST00000477757 YIPF6Q96EC8 236 aa13.82□□□□□ -0.2
PDLIM1-202ENST00000477757 C20orf144Q9BQM9 153 aa13.82□□□□□ -0.2
PDLIM1-202ENST00000477757 TMEM147Q9BVK8 224 aa13.82□□□□□ -0.2
PDLIM1-202ENST00000477757 TMPRSS5Q9H3S3 457 aa13.82□□□□□ -0.2
PDLIM1-202ENST00000477757 ORM2P19652 201 aa13.81□□□□□ -0.2
PDLIM1-202ENST00000477757 S100A7P31151 101 aa13.81□□□□□ -0.2
PDLIM1-202ENST00000477757 STEAP1BQ6NZ63 245 aa13.81□□□□□ -0.2
PDLIM1-202ENST00000477757 NFE4Q86UQ8 179 aa13.81□□□□□ -0.2
PDLIM1-202ENST00000477757 VSIG2Q96IQ7 327 aa13.81□□□□□ -0.2
PDLIM1-202ENST00000477757 NXPH4O95158 308 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 CXCL3P19876 107 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 GCSHP23434 173 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 HAMPP81172 84 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 FAAP20Q6NZ36 180 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 BPIFCQ8NFQ6 507 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 PRR13Q9NZ81 148 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 TNFRSF18Q9Y5U5 241 aa13.8□□□□□ -0.2
PDLIM1-202ENST00000477757 A0A0B4J2A0 478 aa13.79□□□□□ -0.2
PDLIM1-202ENST00000477757 FAM25AB3EWG3 89 aa13.79□□□□□ -0.2
PDLIM1-202ENST00000477757 FAM25CB3EWG5 89 aa13.79□□□□□ -0.2
PDLIM1-202ENST00000477757 FAM25GB3EWG6 89 aa13.79□□□□□ -0.2
PDLIM1-202ENST00000477757 H3BRN7 92 aa13.79□□□□□ -0.2
PDLIM1-202ENST00000477757 CCDC28AQ8IWP9 274 aa13.79□□□□□ -0.2
PDLIM1-202ENST00000477757 SHPKQ9UHJ6 478 aa13.79□□□□□ -0.2
PDLIM1-202ENST00000477757 SNURFLB1AK76 121 aa13.78□□□□□ -0.2
PDLIM1-202ENST00000477757 GATA2P23769 480 aaPredicted RBP13.78□□□□□ -0.2
PDLIM1-202ENST00000477757 RAB11AP62491 216 aa13.78□□□□□ -0.2
PDLIM1-202ENST00000477757 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
PDLIM1-202ENST00000477757 GPR132Q9UNW8 380 aa13.78□□□□□ -0.2
PDLIM1-202ENST00000477757 A0A087X0K7 114 aa13.77□□□□□ -0.21
PDLIM1-202ENST00000477757 RPL7P18124 248 aaKnown RBP13.77□□□□□ -0.21
PDLIM1-202ENST00000477757 PSG3Q16557 428 aa13.77□□□□□ -0.21
PDLIM1-202ENST00000477757 TMEM182Q6ZP80 229 aaPredicted RBP13.77□□□□□ -0.21
PDLIM1-202ENST00000477757 TMED4Q7Z7H5 227 aa13.77□□□□□ -0.21
PDLIM1-202ENST00000477757 SHANK2-AS3Q9BTD1 123 aa13.77□□□□□ -0.21
PDLIM1-202ENST00000477757 TMEM70Q9BUB7 260 aa13.77□□□□□ -0.21
PDLIM1-202ENST00000477757 KRTAP29-1A8MX34 341 aaPredicted RBP13.76□□□□□ -0.21
PDLIM1-202ENST00000477757 PRSS46E5RG02 174 aa13.76□□□□□ -0.21
PDLIM1-202ENST00000477757 AKR1C4P17516 323 aa13.76□□□□□ -0.21
PDLIM1-202ENST00000477757 NCS1P62166 190 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms