RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 HIST1H2BDP58876 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H2BCP62807 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H1AQ02539 215 aaPredicted RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 PDGFRLQ15198 375 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 MSMO1Q15800 293 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST2H2BEQ16778 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 TMEM241Q24JQ0 296 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 VMA21Q3ZAQ7 101 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 OCIAD2Q56VL3 154 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 FAM78AQ5JUQ0 283 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 BCL2L15Q5TBC7 163 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 RASL11AQ6T310 242 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 UNQ9165/PRO28630Q6UXU0 137 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF695Q8IW36 515 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF440Q8IYI8 595 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 H1FOOQ8IZA3 346 aaPredicted RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 Q8N377 158 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 KLHL30-AS1Q8NEE0 82 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 OR4E2Q8NGC2 313 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 OR10G2Q8NGC3 310 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 LMX1AQ8TE12 382 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H2BHQ93079 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 SLAMF6Q96DU3 332 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 TP53RKQ96S44 253 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H2BNQ99877 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H2BMQ99879 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 NDFIP1Q9BT67 221 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 LPAR5Q9H1C0 372 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 TCEAL2Q9H3H9 227 aaPredicted RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 RPP21Q9H633 154 aaKnown RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 TUBA4BQ9H853 241 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 EFCAB1Q9HAE3 211 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 TAF9BQ9HBM6 251 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 C8orf17Q9NRJ1 99 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 PCTPQ9UKL6 214 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF469Q96JG9 3925 aaPredicted RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 IGHV3-49A0A0A0MS15 119 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 IGKV1-6A0A0C4DH72 117 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 LEUTXA8MZ59 168 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 C9JCJ5 164 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 F6UZH7 168 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 H0YJW9 148 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 BCL2L11O43521 198 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 OBSL1O75147 1896 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 IGKV1-39P01597 117 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 HLA-DQA1P01909 254 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 HLA-DQB1P01920 261 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 IGKV1D-39P04432 117 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 IGHV4-34P06331 123 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 LINC00869P0C866 280 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 P0C879 139 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 PTHLHP12272 177 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 IL1RNP18510 177 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 LINC00205P59089 165 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 TAS2R20P59543 309 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 DEFA3P59666 94 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 YPEL3P61236 119 aaPredicted RBP2.04□□□□□ -2.08
HMGN4-202ENST00000477243 RPS25P62851 125 aaKnown RBP2.04□□□□□ -2.08
HMGN4-202ENST00000477243 PPP3R1P63098 170 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 CCL20P78556 96 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 RRN3P1Q2M238 152 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 LAIR2Q6ISS4 152 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 EML6Q6ZMW3 1958 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 PCP2Q8IVA1 136 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 ABCA7Q8IZY2 2146 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 MMGT1Q8N4V1 131 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 SUMF2Q8NBJ7 301 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 OR4C16Q8NGL9 310 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 OR4K13Q8NH42 304 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 FGF13Q92913 245 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 C16orf74Q96GX8 76 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 AP1S3Q96PC3 154 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 ERMAPQ96PL5 475 aaPredicted RBP2.04□□□□□ -2.08
HMGN4-202ENST00000477243 GPX7Q96SL4 187 aaPredicted RBP2.04□□□□□ -2.08
HMGN4-202ENST00000477243 TM2D3Q9BRN9 247 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 HDHD3Q9BSH5 251 aaPredicted RBP2.04□□□□□ -2.08
HMGN4-202ENST00000477243 AICDAQ9GZX7 198 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF286AQ9HBT8 521 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 SND1-IT1Q9HBX3 110 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 OR5AC2Q9NZP5 309 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 KLK5Q9Y337 293 aaPredicted RBP2.04□□□□□ -2.08
HMGN4-202ENST00000477243 CSAG2Q9Y5P2 127 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 TRRAPQ9Y4A5 3859 aa2.04□□□□□ -2.08
HMGN4-202ENST00000477243 PATJQ8NI35 1801 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 HECTD4Q9Y4D8 3996 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 TRBV7-6A0A0J9YX20 115 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 IZUMO1RA6ND01 250 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 GABARAPH6UMI1 98 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 H7C423 109 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 C19orf84I3L1E1 186 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 PLA2G10O15496 165 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 RBFOX2O43251 390 aaKnown RBP eCLIP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 GNG7O60262 68 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 INSP01308 110 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 IFNA17P01571 189 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 APODP05090 189 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 GPX1P07203 203 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF286BP0CG31 522 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF823P16415 610 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms