RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 ZNF688P0C7X2 276 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 B2MP61769 119 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 SNRPD3P62318 126 aaKnown RBP13.17□□□□□ -0.3
SMIM4-202ENST00000476842 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 LINC00305Q7Z4B0 112 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 OR1L4Q8NGR5 311 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 RSG1Q9BU20 258 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 ZMAT4Q9H898 229 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
SMIM4-202ENST00000476842 RPL7P18124 248 aaKnown RBP13.16□□□□□ -0.3
SMIM4-202ENST00000476842 MEOX2P50222 304 aa13.16□□□□□ -0.3
SMIM4-202ENST00000476842 OR2T35Q8NGX2 323 aa13.16□□□□□ -0.3
SMIM4-202ENST00000476842 C17orf77Q96MU5 243 aa13.16□□□□□ -0.3
SMIM4-202ENST00000476842 AQP10Q96PS8 301 aa13.16□□□□□ -0.3
SMIM4-202ENST00000476842 PFDN5Q99471 154 aa13.16□□□□□ -0.3
SMIM4-202ENST00000476842 KIR2DL5BA0A0G2JN68 375 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 KIR2DL5BA0A0G2JPC4 375 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 SOCS3O14543 225 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 IFNA5P01569 189 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 ID1P41134 155 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 SAMD13Q5VXD3 122 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 KIR2DL5AQ8N109 375 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 ZNF709Q8N972 641 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.3
SMIM4-202ENST00000476842 SMIM3Q9BZL3 60 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 WFDC1Q9HC57 220 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 U3KQK5 164 aa13.15□□□□□ -0.3
SMIM4-202ENST00000476842 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
SMIM4-202ENST00000476842 APOC4P55056 127 aa13.14□□□□□ -0.31
SMIM4-202ENST00000476842 PSMG4Q5JS54 123 aa13.14□□□□□ -0.31
SMIM4-202ENST00000476842 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
SMIM4-202ENST00000476842 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
SMIM4-202ENST00000476842 SPATA25Q9BR10 227 aa13.14□□□□□ -0.31
SMIM4-202ENST00000476842 COL7A1Q02388 2944 aa13.14□□□□□ -0.31
SMIM4-202ENST00000476842 UBE2CO00762 179 aa13.13□□□□□ -0.31
SMIM4-202ENST00000476842 ISLRO14498 428 aa13.13□□□□□ -0.31
SMIM4-202ENST00000476842 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
SMIM4-202ENST00000476842 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
SMIM4-202ENST00000476842 PSMB3P49720 205 aa13.13□□□□□ -0.31
SMIM4-202ENST00000476842 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.13□□□□□ -0.31
SMIM4-202ENST00000476842 INO80EQ8NBZ0 244 aaPredicted RBP13.13□□□□□ -0.31
SMIM4-202ENST00000476842 KCNIP2Q9NS61 270 aa13.13□□□□□ -0.31
SMIM4-202ENST00000476842 G3V3Q6 166 aa13.12□□□□□ -0.31
SMIM4-202ENST00000476842 ATF4P18848 351 aaPredicted RBP13.12□□□□□ -0.31
SMIM4-202ENST00000476842 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
SMIM4-202ENST00000476842 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
SMIM4-202ENST00000476842 C16orf92Q96LL3 132 aa13.12□□□□□ -0.31
SMIM4-202ENST00000476842 RCHY1Q96PM5 261 aa13.12□□□□□ -0.31
SMIM4-202ENST00000476842 TNFSF18Q9UNG2 199 aa13.12□□□□□ -0.31
SMIM4-202ENST00000476842 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
SMIM4-202ENST00000476842 A0A087X0K7 114 aa13.11□□□□□ -0.31
SMIM4-202ENST00000476842 Q6ZNX1 250 aa13.11□□□□□ -0.31
SMIM4-202ENST00000476842 STHQ8IWL8 128 aa13.11□□□□□ -0.31
SMIM4-202ENST00000476842 LINC00052Q96N35 136 aa13.11□□□□□ -0.31
SMIM4-202ENST00000476842 CSTL1Q9H114 145 aa13.11□□□□□ -0.31
SMIM4-202ENST00000476842 TRAV5A0A0B4J249 113 aa13.1□□□□□ -0.31
SMIM4-202ENST00000476842 RNF222A6NCQ9 220 aa13.1□□□□□ -0.31
SMIM4-202ENST00000476842 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
SMIM4-202ENST00000476842 GCSAMLQ5JQS6 135 aa13.1□□□□□ -0.31
SMIM4-202ENST00000476842 ACTL10Q5JWF8 245 aa13.1□□□□□ -0.31
SMIM4-202ENST00000476842 Q6ZWC4 215 aa13.1□□□□□ -0.31
SMIM4-202ENST00000476842 TRPT1Q86TN4 253 aaKnown RBP13.1□□□□□ -0.31
SMIM4-202ENST00000476842 ZNF266Q14584 549 aa13.09□□□□□ -0.31
SMIM4-202ENST00000476842 TRAV8-2A0A0B4J237 113 aa13.08□□□□□ -0.32
SMIM4-202ENST00000476842 FAM78BQ5VT40 261 aa13.08□□□□□ -0.32
SMIM4-202ENST00000476842 HRH4Q9H3N8 390 aa13.08□□□□□ -0.32
SMIM4-202ENST00000476842 RPRMQ9NS64 109 aa13.08□□□□□ -0.32
SMIM4-202ENST00000476842 TIMM9Q9Y5J7 89 aa13.08□□□□□ -0.32
SMIM4-202ENST00000476842 H3BMM0 161 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 CXCL2P19875 107 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 FFAR4Q5NUL3 377 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 SPATA31B1PQ5VZV4 182 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 FOXI2Q6ZQN5 318 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 LRRC20Q8TCA0 184 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 C20orf173Q96LM9 149 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 OVOL2Q9BRP0 275 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 SAV1Q9H4B6 383 aaPredicted RBP13.07□□□□□ -0.32
SMIM4-202ENST00000476842 RETNQ9HD89 108 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 TP53TG1Q9Y2A0 90 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
SMIM4-202ENST00000476842 SMLR1H3BR10 107 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 SPP1P10451 314 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 GUK1Q16774 197 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 IGFL4Q6B9Z1 124 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
SMIM4-202ENST00000476842 LCN15Q6UWW0 184 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 RNF183Q96D59 192 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 MRPL32Q9BYC8 188 aaKnown RBP13.06□□□□□ -0.32
SMIM4-202ENST00000476842 RFNGQ9Y644 331 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 NBEAL2Q6ZNJ1 2754 aa13.06□□□□□ -0.32
SMIM4-202ENST00000476842 H3BQ15 152 aa13.05□□□□□ -0.32
SMIM4-202ENST00000476842 SPRY2O43597 315 aa13.05□□□□□ -0.32
SMIM4-202ENST00000476842 DEFB1P60022 68 aa13.05□□□□□ -0.32
SMIM4-202ENST00000476842 GDF5OSQ5U4N7 250 aa13.05□□□□□ -0.32
SMIM4-202ENST00000476842 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
SMIM4-202ENST00000476842 MIR17HGQ75NE6 70 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms