RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CCL4P13236 92 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 ZNF493Q6ZR52 646 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 PRR15Q8IV56 129 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM99Q8N816 258 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 KCNS1Q96KK3 526 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 CCDC140Q96MF4 163 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 AAMDCQ9H7C9 122 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 ZNF665Q9H7R5 613 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 DYSFO75923 2080 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 CACNA1BQ00975 2339 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 HSPB6O14558 160 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 HLA-DOBP13765 273 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 COL8A2P25067 703 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 RPL13AP40429 203 aaKnown RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 CEMP1Q6PRD7 247 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 ODF3L1Q8IXM7 274 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 FAM3DQ96BQ1 224 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 FZR1Q9UM11 496 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 ZNF257Q9Y2Q1 563 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 R4GMQ9 66 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 DOPEY2Q9Y3R5 2298 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 CRISP2P16562 243 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 S100A4P26447 101 aaKnown RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 PPP1CBP62140 327 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 CNRIP1Q96F85 164 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 TM2D3Q9BRN9 247 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 LSM4Q9Y4Z0 139 aaKnown RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 RP1P56715 2156 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 NCOR1O75376 2440 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 TRAV26-2A0A0B4J265 109 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 ZFP92A6NM28 416 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 PATE3B3GLJ2 98 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 NCR2O95944 276 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 ASAH2BP0C7U1 165 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 PMCHL1Q16048 86 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 FAM27D1Q5T7N8 215 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 SDIM1Q6ZPB5 146 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 TCF23Q7RTU1 214 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 MYO15AQ9UKN7 3530 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 CD164L2Q6UWJ8 174 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM255BQ8WV15 326 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 SSBP3Q9BWW4 388 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-206ENST00000474871 Q9H8V8 135 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 MPDZO75970 2070 aa3.85□□□□□ -1.79
NPHP3-206ENST00000474871 IZUMO1RA6ND01 250 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 C8orf87E5RJ46 101 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 ERCC8Q13216 396 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 SAMD5Q5TGI4 173 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 TSKUQ8WUA8 353 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 SPACA5Q96QH8 159 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 SPANXCQ9NY87 97 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 ABCA4P78363 2273 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 DOCK7Q96N67 2140 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 MEIS3P1A6NDR6 274 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 LYZL6O75951 148 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 COX8AP10176 69 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 HMGA2P52926 109 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 RPS11P62280 158 aaKnown RBP eCLIP3.84□□□□□ -1.79
NPHP3-206ENST00000474871 Q56UQ5 140 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 OR4X2Q8NGF9 303 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 LRRC29Q8WV35 223 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM158Q8WZ71 300 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 LINC00479Q96M42 142 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 GNG13Q9P2W3 67 aa3.84□□□□□ -1.79
NPHP3-206ENST00000474871 VCYO14598 125 aa3.84□□□□□ -1.8
NPHP3-206ENST00000474871 GASTP01350 101 aa3.84□□□□□ -1.8
NPHP3-206ENST00000474871 RPL23P62829 140 aaKnown RBP3.84□□□□□ -1.8
NPHP3-206ENST00000474871 MED12LQ86YW9 2145 aa3.84□□□□□ -1.8
NPHP3-206ENST00000474871 TMEM147Q9BVK8 224 aa3.84□□□□□ -1.8
NPHP3-206ENST00000474871 ARID1AO14497 2285 aa3.84□□□□□ -1.8
NPHP3-206ENST00000474871 MED13Q9UHV7 2174 aa3.84□□□□□ -1.8
NPHP3-206ENST00000474871 ASCC3Q8N3C0 2202 aaKnown RBP3.84□□□□□ -1.8
NPHP3-206ENST00000474871 FFAR1O14842 300 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 ANGPTL7O43827 346 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 SS18L1O75177 396 aaPredicted RBP3.83□□□□□ -1.8
NPHP3-206ENST00000474871 WISP2O76076 250 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 GP9P14770 177 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 PSMB3P49720 205 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 ZNF134P52741 427 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 TCF15Q12870 199 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 OR51H1Q8NH63 302 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 EEF1AKMT3Q96AZ1 226 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 SHANK2-AS3Q9BTD1 123 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 OTORQ9NRC9 128 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 TIMM9Q9Y5J7 89 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 KIAA2026Q5HYC2 2103 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 CACNA1CQ13936 2221 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 COX7A1P24310 79 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 EMDP50402 254 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 SSBP1Q04837 148 aaKnown RBP3.83□□□□□ -1.8
NPHP3-206ENST00000474871 TMEM30BQ3MIR4 351 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 TTC32Q5I0X7 151 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 C1orf229Q6ZS94 237 aaPredicted RBP3.83□□□□□ -1.8
NPHP3-206ENST00000474871 C17orf82Q86X59 251 aaPredicted RBP3.83□□□□□ -1.8
NPHP3-206ENST00000474871 OR10J6PQ8NGY7 276 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 FMC1Q96HJ9 113 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 WFDC6Q9BQY6 131 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms