RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TEX13DA0A0J9YY54 714 aaPredicted RBP4.68□□□□□ -1.66
HDAC1-204ENST00000471488 TNFAIP8O95379 198 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 IGHV3-53P01767 116 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 P0C879 139 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 BSXQ3C1V8 233 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 SCGB2B2Q4G0G5 96 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 UBE2NLQ5JXB2 153 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 ZNF493Q6ZR52 646 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 NOXA1Q86UR1 476 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 LYSMD2Q8IV50 215 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 CCDC71LQ8N9Z2 235 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 ZBTB8BQ8NAP8 495 aaPredicted RBP4.68□□□□□ -1.66
HDAC1-204ENST00000471488 OR1B1Q8NGR6 318 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 PARD6GQ9BYG4 376 aaPredicted RBP4.68□□□□□ -1.66
HDAC1-204ENST00000471488 MSRB1Q9NZV6 116 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 FAM30AQ9NZY2 134 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 ICOSQ9Y6W8 199 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 LY96Q9Y6Y9 160 aa4.68□□□□□ -1.66
HDAC1-204ENST00000471488 TRGV1A0A0A0MS02 117 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 SMIM31A0A1B0GVY4 71 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 H7BYZ3 331 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 PAX4O43316 350 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 SNRPCP09234 159 aaKnown RBP4.67□□□□□ -1.66
HDAC1-204ENST00000471488 OR5AC1P0C628 307 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 S100A5P33763 92 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 UCP3P55916 312 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 SCAND1P57086 179 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 ZNF415Q09FC8 603 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 TMEM268Q5VZI3 342 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 Q6ZTI0 123 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 LGI3Q8N145 548 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 RNASE8Q8TDE3 154 aaKnown RBP4.67□□□□□ -1.66
HDAC1-204ENST00000471488 TMEM170AQ8WVE7 144 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 TMEM70Q9BUB7 260 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 TMEM147Q9BVK8 224 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 Q9HAA7 133 aa4.67□□□□□ -1.66
HDAC1-204ENST00000471488 EVI2AP22794 236 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 GATA2P23769 480 aaPredicted RBP4.66□□□□□ -1.66
HDAC1-204ENST00000471488 TGFBR1P36897 503 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 CDKN1BP46527 198 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 RND3P61587 244 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 KIR3DS1Q14943 382 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 PSG3Q16557 428 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 RNASE10Q5GAN6 216 aaKnown RBP4.66□□□□□ -1.66
HDAC1-204ENST00000471488 WFDC10BQ8IUB3 73 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 FAM219AQ8IW50 185 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 OR8A1Q8NGG7 326 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 OR52E5Q8NH55 327 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 DTD1Q8TEA8 209 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 VSIG2Q96IQ7 327 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 PRR13Q9NZ81 148 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 ANAPC10Q9UM13 185 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 C14orf166Q9Y224 244 aaKnown RBP4.66□□□□□ -1.66
HDAC1-204ENST00000471488 TMEM56-RWDD3S4R434 201 aa4.66□□□□□ -1.66
HDAC1-204ENST00000471488 IGKV1D-37A0A075B6S9 117 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 TRAV8-2A0A0B4J237 113 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 TRAV12-3A0A0B4J271 114 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 SMCO3A2RU48 225 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 A6NHS1 94 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 CRYM-AS1A6NIL9 109 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 A8MTW9 85 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 E5RGE8 158 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 H3BNG1 76 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 CRYGDP07320 174 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 SULT1A3P0DMM9 295 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 SULT1A4P0DMN0 295 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 IAPPP10997 89 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 ANXA7P20073 488 aaKnown RBP4.65□□□□□ -1.67
HDAC1-204ENST00000471488 LSM3P62310 102 aaKnown RBP4.65□□□□□ -1.67
HDAC1-204ENST00000471488 NEDD8Q15843 81 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 NMSQ5H8A3 153 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 OR13C8Q8NGS7 320 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 ZFAND1Q8TCF1 268 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 MARCH1Q8TCQ1 289 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 RBPMSQ93062 196 aaKnown RBP4.65□□□□□ -1.67
HDAC1-204ENST00000471488 RPUSD4Q96CM3 377 aaKnown RBP4.65□□□□□ -1.67
HDAC1-204ENST00000471488 ZNF486Q96H40 463 aaPredicted RBP4.65□□□□□ -1.67
HDAC1-204ENST00000471488 C8orf49Q96NF6 230 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 RBKSQ9H477 322 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 COMMD3Q9UBI1 195 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 FUT9Q9Y231 359 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 PRELID1Q9Y255 219 aa4.65□□□□□ -1.67
HDAC1-204ENST00000471488 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.64□□□□□ -1.67
HDAC1-204ENST00000471488 FAM25AB3EWG3 89 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 FAM25CB3EWG5 89 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 FAM25GB3EWG6 89 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 ANKRD65E5RJM6 399 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 PRAF2O60831 178 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 CD3DP04234 171 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 OR5G3P0C626 314 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 S100A7P31151 101 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 RAP2BP61225 183 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 RAB11AP62491 216 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 AKR1C1Q04828 323 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 GFI1BQ5VTD9 330 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 GGNBP1Q5YKI7 109 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 LYPD5Q6UWN5 251 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 SELENOHQ8IZQ5 122 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms