RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 C10orf126Q8N4M7 172 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 ST20-AS1Q8NBB2 130 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 FBXO36Q8NEA4 188 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 ZNF555Q8NEP9 628 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 PFN4Q8NHR9 129 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 OR2A7Q96R45 310 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 MARVELD1Q9BSK0 173 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 MRPL20Q9BYC9 149 aaKnown RBP1.99□□□□□ -2.09
VPS13A-210ENST00000471439 SYT4Q9H2B2 425 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 DAZ1Q9NQZ3 744 aaKnown RBP1.99□□□□□ -2.09
VPS13A-210ENST00000471439 RHBDL2Q9NX52 303 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 LRRC42Q9Y546 428 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 TRAV6A0A075B6T7 132 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 IGHV3-43A0A0B4J1X8 118 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 IBA57-AS1B1ANH7 110 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 SLC22A1O15245 554 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 TPST1O60507 370 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 PLIN3O60664 434 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 IGKV1-17P01599 117 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 PMCHP20382 165 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 SPRR2DP22532 72 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 CFL1P23528 166 aaKnown RBP1.98□□□□□ -2.09
VPS13A-210ENST00000471439 RPS27P42677 84 aaKnown RBP1.98□□□□□ -2.09
VPS13A-210ENST00000471439 SERPINB9P50453 376 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 BCAP31P51572 246 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 FXYD7P58549 80 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 RRN3P1Q2M238 152 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 YIF1BQ5BJH7 314 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 LYPD5Q6UWN5 251 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 UBL4BQ8N7F7 174 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 ZNF565Q8N9K5 539 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 UBAC2Q8NBM4 344 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 OR4C16Q8NGL9 310 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 Q96M85 177 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 TEAD3Q99594 435 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 COPS4Q9BT78 406 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 CHCHD7Q9BUK0 85 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 ZNF426Q9BUY5 554 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 MS4A6AQ9H2W1 248 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 NCOR1P1Q9H4R4 102 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 CACYBPQ9HB71 228 aaKnown RBP1.98□□□□□ -2.09
VPS13A-210ENST00000471439 BCL2L10Q9HD36 194 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 CALML5Q9NZT1 146 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 OR51B2Q9Y5P1 312 aa1.98□□□□□ -2.09
VPS13A-210ENST00000471439 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
VPS13A-210ENST00000471439 A0A087WUU8 490 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 CPSF4LA6NMK7 179 aaKnown RBP1.97□□□□□ -2.09
VPS13A-210ENST00000471439 H3BN98 237 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 HSBP1O75506 76 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 OR2H2O95918 312 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 PTTG1O95997 202 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 GYPCP04921 128 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 SRMP19623 302 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 PRKACBP22694 351 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 PSMB6P28072 239 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 CDC42P60953 191 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 IFITM3Q01628 133 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 PRR9Q5T870 116 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 SLC35G3Q8N808 338 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 OR51L1Q8NGJ5 315 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 CEP19Q96LK0 163 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 CCDC42Q96M95 316 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 RHPN1-AS1Q9BWJ2 59 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 SMPXQ9UHP9 88 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 V9GYQ6 96 aa1.97□□□□□ -2.09
VPS13A-210ENST00000471439 MEIKINA0A087WXM9 373 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 PQLC2LA1A4F0 135 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 SDCBPO00560 298 aaPredicted RBP1.96□□□□□ -2.1
VPS13A-210ENST00000471439 DENRO43583 198 aaKnown RBP1.96□□□□□ -2.1
VPS13A-210ENST00000471439 SULT1B1O43704 296 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 MT2AP02795 61 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 CSN2P05814 226 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 RBP1P09455 135 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 PSKH1P11801 424 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 LGALS3P17931 250 aaKnown RBP1.96□□□□□ -2.1
VPS13A-210ENST00000471439 NTF3P20783 257 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 MYL5Q02045 173 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 NXNL2Q5VZ03 156 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 DEGS2Q6QHC5 323 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 TMPRSS11AQ6ZMR5 421 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 ENKURQ8TC29 256 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 PHB2Q99623 299 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 BCL7BQ9BQE9 202 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 NSRP1Q9H0G5 558 aaKnown RBP1.96□□□□□ -2.1
VPS13A-210ENST00000471439 RGCCQ9H4X1 137 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 DNAJC27Q9NZQ0 273 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 CLEC2DQ9UHP7 191 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 ATP6V1DQ9Y5K8 247 aa1.96□□□□□ -2.1
VPS13A-210ENST00000471439 TRAV27A0A087WT01 109 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 MIF4GDA9UHW6 222 aaKnown RBP1.95□□□□□ -2.1
VPS13A-210ENST00000471439 J3QRK9 145 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 ENTPD6O75354 484 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 MT1FP04733 61 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 LINC00032P0C843 101 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 RBX1P62877 108 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 OGFRL1Q5TC84 451 aaPredicted RBP1.95□□□□□ -2.1
VPS13A-210ENST00000471439 DHRS4L2Q6PKH6 230 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 OR51A7Q8NH64 312 aa1.95□□□□□ -2.1
VPS13A-210ENST00000471439 DPH3Q96FX2 82 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms