RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ZMAT4Q9H898 229 aa14.6□□□□□ -0.07
HDAC7-220ENST00000471235 SLC39A9Q9NUM3 307 aa14.6□□□□□ -0.07
HDAC7-220ENST00000471235 PXMP4Q9Y6I8 212 aa14.6□□□□□ -0.07
HDAC7-220ENST00000471235 RPL35AP18077 110 aaKnown RBP14.59□□□□□ -0.07
HDAC7-220ENST00000471235 FGL1Q08830 312 aa14.59□□□□□ -0.07
HDAC7-220ENST00000471235 PSMG4Q5JS54 123 aa14.59□□□□□ -0.07
HDAC7-220ENST00000471235 S100A7AQ86SG5 101 aa14.59□□□□□ -0.07
HDAC7-220ENST00000471235 C17orf77Q96MU5 243 aa14.59□□□□□ -0.07
HDAC7-220ENST00000471235 RCHY1Q96PM5 261 aa14.59□□□□□ -0.07
HDAC7-220ENST00000471235 SPATA25Q9BR10 227 aa14.59□□□□□ -0.07
HDAC7-220ENST00000471235 WDR61Q9GZS3 305 aaKnown RBP14.59□□□□□ -0.07
HDAC7-220ENST00000471235 SEPSECSQ9HD40 501 aaKnown RBP14.59□□□□□ -0.07
HDAC7-220ENST00000471235 RETNQ9HD89 108 aa14.59□□□□□ -0.07
HDAC7-220ENST00000471235 C10orf113Q5VZT2 155 aa14.58□□□□□ -0.08
HDAC7-220ENST00000471235 Q6ZRG5 221 aa14.58□□□□□ -0.08
HDAC7-220ENST00000471235 LINC00305Q7Z4B0 112 aa14.58□□□□□ -0.08
HDAC7-220ENST00000471235 ELOA3CA0A087WX78 387 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-220ENST00000471235 G3V3Q6 166 aa14.57□□□□□ -0.08
HDAC7-220ENST00000471235 RPL7P18124 248 aaKnown RBP14.57□□□□□ -0.08
HDAC7-220ENST00000471235 SNRPD3P62318 126 aaKnown RBP14.57□□□□□ -0.08
HDAC7-220ENST00000471235 MORN5Q5VZ52 161 aa14.57□□□□□ -0.08
HDAC7-220ENST00000471235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.57□□□□□ -0.08
HDAC7-220ENST00000471235 OR1L4Q8NGR5 311 aa14.57□□□□□ -0.08
HDAC7-220ENST00000471235 OR2T35Q8NGX2 323 aa14.57□□□□□ -0.08
HDAC7-220ENST00000471235 RSG1Q9BU20 258 aa14.57□□□□□ -0.08
HDAC7-220ENST00000471235 WFDC1Q9HC57 220 aa14.57□□□□□ -0.08
HDAC7-220ENST00000471235 KNCNA6PVL3 124 aa14.56□□□□□ -0.08
HDAC7-220ENST00000471235 PSMB3P49720 205 aa14.56□□□□□ -0.08
HDAC7-220ENST00000471235 MEOX2P50222 304 aa14.56□□□□□ -0.08
HDAC7-220ENST00000471235 APOC4P55056 127 aa14.56□□□□□ -0.08
HDAC7-220ENST00000471235 AQP10Q96PS8 301 aa14.56□□□□□ -0.08
HDAC7-220ENST00000471235 PFDN5Q99471 154 aa14.56□□□□□ -0.08
HDAC7-220ENST00000471235 DNAJC4Q9NNZ3 241 aa14.56□□□□□ -0.08
HDAC7-220ENST00000471235 KIR2DL5BA0A0G2JN68 375 aa14.55□□□□□ -0.08
HDAC7-220ENST00000471235 KIR2DL5BA0A0G2JPC4 375 aa14.55□□□□□ -0.08
HDAC7-220ENST00000471235 MRPS12O15235 138 aaKnown RBP14.55□□□□□ -0.08
HDAC7-220ENST00000471235 ATF4P18848 351 aaPredicted RBP14.55□□□□□ -0.08
HDAC7-220ENST00000471235 KIR2DL5AQ8N109 375 aa14.55□□□□□ -0.08
HDAC7-220ENST00000471235 KIR2DL5BQ8NHK3 375 aa14.55□□□□□ -0.08
HDAC7-220ENST00000471235 KCNIP2Q9NS61 270 aa14.55□□□□□ -0.08
HDAC7-220ENST00000471235 RNF24Q9Y225 148 aa14.55□□□□□ -0.08
HDAC7-220ENST00000471235 FXYD6-FXYD2A0A087WZ82 144 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 A0A087X0K7 114 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 ISLRO14498 428 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 IFNA5P01569 189 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 ID1P41134 155 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 GCSAMLQ5JQS6 135 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 SAMD13Q5VXD3 122 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 TRPT1Q86TN4 253 aaKnown RBP14.54□□□□□ -0.08
HDAC7-220ENST00000471235 STHQ8IWL8 128 aa14.54□□□□□ -0.08
HDAC7-220ENST00000471235 PARD6GQ9BYG4 376 aaPredicted RBP14.54□□□□□ -0.08
HDAC7-220ENST00000471235 C17orf112F2Z3M2 114 aa14.53□□□□□ -0.08
HDAC7-220ENST00000471235 ACTL10Q5JWF8 245 aa14.53□□□□□ -0.08
HDAC7-220ENST00000471235 ZNF709Q8N972 641 aa14.53□□□□□ -0.08
HDAC7-220ENST00000471235 GATAD1Q8WUU5 269 aa14.53□□□□□ -0.08
HDAC7-220ENST00000471235 C16orf92Q96LL3 132 aa14.53□□□□□ -0.08
HDAC7-220ENST00000471235 C20orf173Q96LM9 149 aa14.53□□□□□ -0.08
HDAC7-220ENST00000471235 LINC00052Q96N35 136 aa14.53□□□□□ -0.08
HDAC7-220ENST00000471235 STAB2Q8WWQ8 2551 aa14.52□□□□□ -0.08
HDAC7-220ENST00000471235 TRAV5A0A0B4J249 113 aa14.52□□□□□ -0.09
HDAC7-220ENST00000471235 RNF222A6NCQ9 220 aa14.52□□□□□ -0.09
HDAC7-220ENST00000471235 DEFB1P60022 68 aa14.52□□□□□ -0.09
HDAC7-220ENST00000471235 SCGB1C1Q8TD33 95 aa14.52□□□□□ -0.09
HDAC7-220ENST00000471235 TNFSF18Q9UNG2 199 aa14.52□□□□□ -0.09
HDAC7-220ENST00000471235 TRAV8-2A0A0B4J237 113 aa14.51□□□□□ -0.09
HDAC7-220ENST00000471235 UBE2CO00762 179 aa14.51□□□□□ -0.09
HDAC7-220ENST00000471235 DEFB135Q30KP9 77 aa14.51□□□□□ -0.09
HDAC7-220ENST00000471235 BPIFA4PQ86YQ2 179 aa14.51□□□□□ -0.09
HDAC7-220ENST00000471235 NBEAL2Q6ZNJ1 2754 aa14.51□□□□□ -0.09
HDAC7-220ENST00000471235 SMLR1H3BR10 107 aa14.5□□□□□ -0.09
HDAC7-220ENST00000471235 HLA-DRB4P13762 266 aa14.5□□□□□ -0.09
HDAC7-220ENST00000471235 GDF5OSQ5U4N7 250 aa14.5□□□□□ -0.09
HDAC7-220ENST00000471235 OVOL2Q9BRP0 275 aa14.5□□□□□ -0.09
HDAC7-220ENST00000471235 CSTL1Q9H114 145 aa14.5□□□□□ -0.09
HDAC7-220ENST00000471235 RFNGQ9Y644 331 aa14.5□□□□□ -0.09
HDAC7-220ENST00000471235 HLA-DRB4X5D2U9 266 aa14.5□□□□□ -0.09
HDAC7-220ENST00000471235 IGLC2P0DOY2 106 aa14.49□□□□□ -0.09
HDAC7-220ENST00000471235 FFAR4Q5NUL3 377 aa14.49□□□□□ -0.09
HDAC7-220ENST00000471235 SPATA31B1PQ5VZV4 182 aa14.49□□□□□ -0.09
HDAC7-220ENST00000471235 IGFL4Q6B9Z1 124 aa14.49□□□□□ -0.09
HDAC7-220ENST00000471235 FOXI2Q6ZQN5 318 aa14.49□□□□□ -0.09
HDAC7-220ENST00000471235 Q6ZWC4 215 aa14.49□□□□□ -0.09
HDAC7-220ENST00000471235 RNF182Q8N6D2 247 aa14.49□□□□□ -0.09
HDAC7-220ENST00000471235 INO80EQ8NBZ0 244 aaPredicted RBP14.49□□□□□ -0.09
HDAC7-220ENST00000471235 SAV1Q9H4B6 383 aaPredicted RBP14.49□□□□□ -0.09
HDAC7-220ENST00000471235 H3BMM0 161 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 CA1P00915 261 aaPredicted RBP14.48□□□□□ -0.09
HDAC7-220ENST00000471235 SNRPCP09234 159 aaKnown RBP14.48□□□□□ -0.09
HDAC7-220ENST00000471235 CXCL2P19875 107 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 C4BPBP20851 252 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 ZNF266Q14584 549 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 FAM78BQ5VT40 261 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 LCN15Q6UWW0 184 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 Q6ZNX1 250 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 WWC2-AS2Q96NR7 200 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 RPRMQ9NS64 109 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 TP53TG1Q9Y2A0 90 aa14.48□□□□□ -0.09
HDAC7-220ENST00000471235 F6UB75 175 aa14.47□□□□□ -0.09
HDAC7-220ENST00000471235 H3BTX0 84 aa14.47□□□□□ -0.09
HDAC7-220ENST00000471235 SLC17A3O00476 420 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms