RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 HTN1P15515 57 aa8.7□□□□□ -1.02
CHD3-208ENST00000470531 CD69Q07108 199 aa8.7□□□□□ -1.02
CHD3-208ENST00000470531 MT-ND6P03923 174 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 FER1L6-AS1Q8NA97 138 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 TMEM70Q9BUB7 260 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 Q9H3A6 140 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 AAMDCQ9H7C9 122 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 GP6Q9HCN6 339 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 TRBV6-6A0A0A6YYG2 114 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 VSTM2AQ8TAG5 236 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 PMS2P5A8MQ11 134 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 VDAC2P45880 294 aaPredicted RBP8.69□□□□□ -1.02
CHD3-208ENST00000470531 Q8TAT8 98 aa8.69□□□□□ -1.02
CHD3-208ENST00000470531 C15orf65H3BRN8 121 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 SS18L1O75177 396 aaPredicted RBP8.68□□□□□ -1.02
CHD3-208ENST00000470531 HBBP68871 147 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 VWC2Q2TAL6 325 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 C1orf174Q8IYL3 243 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 V9GYV3 84 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 GCSHP23434 173 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 BPIFA4PQ86YQ2 179 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 PRR7Q8TB68 274 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 KMT2EQ8IZD2 1858 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 C10orf142B7Z368 130 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 EVI2AP22794 236 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 PRCDQ00LT1 54 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 RITA1Q96K30 269 aa8.68□□□□□ -1.02
CHD3-208ENST00000470531 CX3CL1P78423 397 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 PIEZO1Q92508 2521 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 IZUMO1RA6ND01 250 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 K7EMI3 77 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 SPRY2O43597 315 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 WT1-ASQ06250 92 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
CHD3-208ENST00000470531 TMEM136Q6ZRR5 245 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 TEX45Q8NA69 505 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 UBTD1Q9HAC8 227 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 PEF1Q9UBV8 284 aaKnown RBP8.67□□□□□ -1.02
CHD3-208ENST00000470531 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 C7orf71A4D174 169 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 NPIPB11E5RHQ5 1161 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 IGKV3-15P01624 115 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 LIPFP07098 398 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 TSPOP30536 169 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 CKS2P33552 79 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 C18orf32Q8TCD1 76 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 NGBQ9NPG2 151 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 MRPL36Q9P0J6 103 aaKnown RBP8.67□□□□□ -1.02
CHD3-208ENST00000470531 EPDR1Q9UM22 224 aa8.67□□□□□ -1.02
CHD3-208ENST00000470531 RNASE2P10153 161 aaKnown RBP8.66□□□□□ -1.02
CHD3-208ENST00000470531 KLRD1Q13241 179 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 KRTAP27-1Q3LI81 207 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 PRR30Q53SZ7 412 aaPredicted RBP8.66□□□□□ -1.02
CHD3-208ENST00000470531 PRSS57Q6UWY2 283 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 LCNL1Q6ZST4 164 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 MTURNQ8N3F0 131 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 FAM181BA6NEQ2 426 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 IGLL1P15814 213 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 TXNDC17Q9BRA2 123 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 GNB1LQ9BYB4 327 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 SLC25A15Q9Y619 301 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 S100A4P26447 101 aaKnown RBP8.66□□□□□ -1.02
CHD3-208ENST00000470531 YPEL3P61236 119 aaPredicted RBP8.66□□□□□ -1.02
CHD3-208ENST00000470531 TIMM23BQ5SRD1 257 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 HIVEP3Q5T1R4 2406 aa8.66□□□□□ -1.02
CHD3-208ENST00000470531 TRAV8-6A0A0B4J262 113 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 PPIAL4CA0A0B4J2A2 164 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 PPIAL4GP0DN37 164 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 LOXL3P58215 753 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 PSG9Q00887 426 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 GPR82Q96P67 336 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 TGFAP01135 160 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 IGLC2P0DOY2 106 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 IGLC3P0DOY3 106 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.02
CHD3-208ENST00000470531 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
CHD3-208ENST00000470531 IGKV2-40A0A087WW87 121 aaPredicted RBP8.65□□□□□ -1.03
CHD3-208ENST00000470531 IGKV2D-40P01614 121 aaPredicted RBP8.65□□□□□ -1.03
CHD3-208ENST00000470531 Q8N7P7 452 aa8.65□□□□□ -1.03
CHD3-208ENST00000470531 GAFA1Q96PS6 74 aa8.65□□□□□ -1.03
CHD3-208ENST00000470531 SMG1Q96Q15 3661 aaKnown RBP8.64□□□□□ -1.03
CHD3-208ENST00000470531 A0A1W2PPI3 338 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 C17orf100A8MU93 164 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 H3BUT2 72 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 IGHV1-69-2A0A0G2JMI3 117 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 TMEM75Q8N9X5 138 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 ZNF257Q9Y2Q1 563 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 TSSC4Q9Y5U2 329 aaPredicted RBP8.64□□□□□ -1.03
CHD3-208ENST00000470531 TMEM189A5PLL7 270 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 ARMS2P0C7Q2 107 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms