RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 PRR15Q8IV56 129 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 SAXO1Q8IYX7 474 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 TCTE3Q8IZS6 198 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 TMEM105Q8N8V8 129 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 TTTY13Q9BZ97 58 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 YIPF3Q9GZM5 350 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 XAGE1AQ9HD64 81 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 SLC39A9Q9NUM3 307 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 CALML5Q9NZT1 146 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 DDX60LQ5H9U9 1706 aaKnown RBP2.93□□□□□ -1.94
SCFD1-205ENST00000469043 C10orf71Q711Q0 1435 aa2.93□□□□□ -1.94
SCFD1-205ENST00000469043 TRAV5A0A0B4J249 113 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 A0A0D9SFI3 127 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 A0A1B0GW64 132 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 FABP5P3A8MUU1 101 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 A8MUU9 505 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 ATP6V1G2-DDX39BF2Z307 99 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 M0R378 163 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 OR2T1O43869 369 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 IGHV1-69P01742 117 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 SCTP09683 121 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 ZNF286BP0CG31 522 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 S100PP25815 95 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 HLA-DMBP28068 263 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 RBM11P57052 281 aaKnown RBP2.92□□□□□ -1.94
SCFD1-205ENST00000469043 FXYD7P58549 80 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 KRTAP10-1P60331 282 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 HIST1H4AP62805 103 aaKnown RBP2.92□□□□□ -1.94
SCFD1-205ENST00000469043 RPL18Q07020 188 aaKnown RBP2.92□□□□□ -1.94
SCFD1-205ENST00000469043 BCL2L15Q5TBC7 163 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 C1orf140Q5VVS0 124 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 ZNF322Q6U7Q0 402 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-205ENST00000469043 IFT20Q8IY31 132 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 RNF175Q8N4F7 328 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 RPP25LQ8N5L8 163 aaKnown RBP2.92□□□□□ -1.94
SCFD1-205ENST00000469043 CNEP1R1Q8N9A8 125 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 OR52R1Q8NGF1 315 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 PPTC7Q8NI37 304 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 STAG3L4Q8TBR4 150 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 MND1Q9BWT6 205 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 OTORQ9NRC9 128 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 PRR14LQ5THK1 2151 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 CITO14578 2027 aa2.92□□□□□ -1.94
SCFD1-205ENST00000469043 PRRC2AP48634 2157 aaKnown RBP2.91□□□□□ -1.94
SCFD1-205ENST00000469043 COL1A1P02452 1464 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-205ENST00000469043 TANC2Q9HCD6 1990 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 MEIKINA0A087WXM9 373 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 ARRDC5A6NEK1 342 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 PANO1I0J062 215 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 J3QQQ9 107 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 M0R2Z0 102 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 LYZL6O75951 148 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 LY6HO94772 140 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 DPM2O94777 84 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 UCHL1P09936 223 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 EVI2AP22794 236 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 PSMB8P28062 276 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 SRP14P37108 136 aaKnown RBP2.91□□□□□ -1.94
SCFD1-205ENST00000469043 YPEL3P61236 119 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-205ENST00000469043 RRAS2P62070 204 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-205ENST00000469043 EIF5AP63241 154 aaKnown RBP2.91□□□□□ -1.94
SCFD1-205ENST00000469043 ZNF79Q15937 498 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 LINC01554Q52M75 96 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 SPANXN3Q5MJ09 141 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 LDLRAD2Q5SZI1 272 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 SDIM1Q6ZPB5 146 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 LYZL2Q7Z4W2 148 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 TRAPPC6BQ86SZ2 158 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 C10orf126Q8N4M7 172 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 C3orf22Q8N5N4 141 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 OR8D4Q8NGM9 314 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 OR2T10Q8NGZ9 312 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 NAT8BQ9UHF3 227 aa2.91□□□□□ -1.94
SCFD1-205ENST00000469043 IGLV4-69A0A075B6H9 119 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 A0A087X0T9 212 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 IRGMA1A4Y4 181 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 ODAMA1E959 279 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 GRIFINA4D1Z8 144 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 C19orf71A6NCJ1 209 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 C17orf51A8MQB3 221 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 TMEM256-PLSCR3K7ERE1 68 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 GGCTO75223 188 aaKnown RBP2.9□□□□□ -1.95
SCFD1-205ENST00000469043 C1QAP02745 245 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 IGLV7-43P04211 117 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 LGALS3P17931 250 aaKnown RBP2.9□□□□□ -1.95
SCFD1-205ENST00000469043 AKR1C1Q04828 323 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 FUT5Q11128 374 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 NEDD8Q15843 81 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 VMA21Q3ZAQ7 101 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 ZFP2Q6ZN57 461 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 SMIM5Q71RC9 77 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 DEFB132Q7Z7B7 95 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 BPIFA4PQ86YQ2 179 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 SLC30A7Q8NEW0 376 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 BPIFB6Q8NFQ5 453 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 OR4K15Q8NH41 348 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 UBALD1Q8TB05 177 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 TMEM203Q969S6 136 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 ZC2HC1AQ96GY0 325 aa2.9□□□□□ -1.95
SCFD1-205ENST00000469043 C12orf57Q99622 126 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms