RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 C3orf56Q8N813 242 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 OR1L4Q8NGR5 311 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 OR1B1Q8NGR6 318 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 SUN5Q8TC36 379 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 RNF141Q8WVD5 230 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 TMEM190Q8WZ59 177 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 RAB24Q969Q5 203 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 SAT2Q96F10 170 aaPredicted RBP4.51□□□□□ -1.69
USP39-213ENST00000467885 SHANK2-AS3Q9BTD1 123 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 C20orf24Q9BUV8 137 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 PBDC1Q9BVG4 233 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 RHPN1-AS1Q9BWJ2 59 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 SCRT1Q9BWW7 348 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 SLC25A39Q9BZJ4 359 aaPredicted RBP4.51□□□□□ -1.69
USP39-213ENST00000467885 ACTR3CQ9C0K3 210 aaPredicted RBP4.51□□□□□ -1.69
USP39-213ENST00000467885 DOK5Q9P104 306 aa4.51□□□□□ -1.69
USP39-213ENST00000467885 IGHV3OR16-13A0A075B7E8 117 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 IGHV3-49A0A0A0MS15 119 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 IGHV3-74A0A0B4J1X5 117 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 IGHV7-4-1A0A0J9YVY3 117 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 A0A1W2PPV4 95 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 C2orf70A6NJV1 201 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 A8MWP6 167 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 H3BQ15 152 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 H3BRN7 92 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 OVOL1O14753 267 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 HMGB3O15347 200 aaKnown RBP4.5□□□□□ -1.69
USP39-213ENST00000467885 COX7A2P2O60397 106 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 IFNA7P01567 189 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 STAG3L2P0CL84 134 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 STAG3L3P0CL85 134 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 FOLR2P14207 255 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 PMS2P11Q13670 270 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 DEFB114Q30KQ6 69 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 KHDC1LQ5JSQ8 128 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 AKR1C8PQ5T2L2 129 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 C1orf194Q5T5A4 169 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 LEMD1Q68G75 181 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 FAM122CQ6P4D5 195 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 DPPA3Q6W0C5 159 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 LINC00482Q8N8I6 264 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 OR9G4Q8NGQ1 327 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 SFT2D1Q8WV19 159 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 RNF2Q99496 336 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 TMPRSS5Q9H3S3 457 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 SIGLEC8Q9NYZ4 499 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 TECRQ9NZ01 308 aaKnown RBP4.5□□□□□ -1.69
USP39-213ENST00000467885 RABAC1Q9UI14 185 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 FUT9Q9Y231 359 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 HIGD1AQ9Y241 93 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 UFC1Q9Y3C8 167 aa4.5□□□□□ -1.69
USP39-213ENST00000467885 COL6A5A8TX70 2615 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 IGHV3-66A0A0C4DH42 116 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 ZNF785A8K8V0 405 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 RGS13O14921 159 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 SCGB2A1O75556 95 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 NMBP08949 121 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 NBEAP1P0C6P0 100 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 RIPPLY3P57055 190 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 RHOBP62745 196 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 BLOC1S1P78537 153 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 KRTAP21-3Q3LHN1 58 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 LCN15Q6UWW0 184 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 ZNF767PQ75MW2 155 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 OR4F17Q8NGA8 305 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 FAM213BQ8TBF2 198 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 PCNPQ8WW12 178 aaKnown RBP4.49□□□□□ -1.69
USP39-213ENST00000467885 GLMPQ8WWB7 406 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 MARC2Q969Z3 335 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 FXYD5Q96DB9 178 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 OR4F4Q96R69 305 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 METTL26Q96S19 204 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 PFDN5Q99471 154 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 SLC25A2Q9BXI2 301 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 OR51M1Q9H341 326 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 DAZ1Q9NQZ3 744 aaKnown RBP4.49□□□□□ -1.69
USP39-213ENST00000467885 KCNIP2Q9NS61 270 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 ZNF586Q9NXT0 402 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 TMEM14CQ9P0S9 112 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 MLXQ9UH92 298 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 UBQLN2Q9UHD9 624 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 SELENOKQ9Y6D0 94 aa4.49□□□□□ -1.69
USP39-213ENST00000467885 CTXND1A0A1B0GTU2 59 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 A0A1W2PS18 150 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 ZNF705EA8MWA4 302 aaPredicted RBP4.48□□□□□ -1.69
USP39-213ENST00000467885 NDUFB4O95168 129 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 SNRPCP09234 159 aaKnown RBP4.48□□□□□ -1.69
USP39-213ENST00000467885 IGLC2P0DOY2 106 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 PYYP10082 97 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 HIST1H1EP10412 219 aaKnown RBP4.48□□□□□ -1.69
USP39-213ENST00000467885 GCHFRP30047 84 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 CDC34P49427 236 aaPredicted RBP4.48□□□□□ -1.69
USP39-213ENST00000467885 FGF8P55075 233 aaPredicted RBP4.48□□□□□ -1.69
USP39-213ENST00000467885 CLLU1Q5K131 121 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 LRRC20Q8TCA0 184 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 ELOVL1Q9BW60 279 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 MRPL32Q9BYC8 188 aaKnown RBP4.48□□□□□ -1.69
USP39-213ENST00000467885 HRH4Q9H3N8 390 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms