RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	MBD2	Q9UBB5	411 aa		11.14	□□□□□ -0.63
SNU13-205	ENST00000463675	UBE2C	O00762	179 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	MPC2	O95563	127 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	S100A11	P31949	105 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	PSMB3	P49720	205 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	PLP1	P60201	277 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	FGL1	Q08830	312 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	FCN2	Q15485	313 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	GDF5OS	Q5U4N7	250 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	MORN5	Q5VZ52	161 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	IGFL4	Q6B9Z1	124 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	C20orf173	Q96LM9	149 aa		11.13	□□□□□ -0.63
SNU13-205	ENST00000463675	IGKV3-20	P01619	116 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	SNRPC	P09234	159 aa	Known RBP	11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	PRB4	P10163	310 aa	Predicted RBP	11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	ATF4	P18848	351 aa	Predicted RBP	11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	RAB31	Q13636	194 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	OPCML	Q14982	345 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	LINC00305	Q7Z4B0	112 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	OR11H7	Q8NGC8	314 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	RNF183	Q96D59	192 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	C16orf92	Q96LL3	132 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	RNF126	Q9BV68	326 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	SLC25A31	Q9H0C2	315 aa		11.12	□□□□□ -0.63
SNU13-205	ENST00000463675	CSMD3	Q7Z407	3707 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675		A0A0J9YWU9	116 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675		F6UB75	175 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	PET100	P0DJ07	73 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	S100A7	P31151	101 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	ID1	P41134	155 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	PRR20E	P86478	221 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	PRR20C	P86479	221 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	PRR20D	P86480	221 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	PRR20B	P86481	221 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	PRR20A	P86496	221 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	RGS21	Q2M5E4	152 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	RNF182	Q8N6D2	247 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	TMEM37	Q8WXS4	190 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	SMIM3	Q9BZL3	60 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	MED28	Q9H204	178 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	CLEC5A	Q9NY25	188 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	TP53TG1	Q9Y2A0	90 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675	PXMP4	Q9Y6I8	212 aa		11.11	□□□□□ -0.63
SNU13-205	ENST00000463675		H3BTX0	84 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	ISLR	O14498	428 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	GIG44	P09565	113 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	LYL1	P12980	280 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	HLA-DRB4	P13762	266 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	RPL7	P18124	248 aa	Known RBP	11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	MEOX2	P50222	304 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	B2M	P61769	119 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	C10orf113	Q5VZT2	155 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	GPR82	Q96P67	336 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	NPCDR1	Q9BY65	106 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	SEPSECS	Q9HD40	501 aa	Known RBP	11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	SLC39A9	Q9NUM3	307 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	HLA-DRB4	X5D2U9	266 aa		11.1	□□□□□ -0.63
SNU13-205	ENST00000463675	TRAV8-2	A0A0B4J237	113 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675		H3BMM0	161 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	C3orf84	H3BNL1	204 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	SPP1	P10451	314 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	HLA-DMB	P28068	263 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	FXYD7	P58549	80 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	ATP6V1F	Q16864	119 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	GCSAML	Q5JQS6	135 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	PXDC1	Q5TGL8	231 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	OR11H2	Q8NH07	326 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	HSPB11	Q9Y547	144 aa		11.09	□□□□□ -0.63
SNU13-205	ENST00000463675	TENM2	Q9NT68	2774 aa		11.08	□□□□□ -0.64
SNU13-205	ENST00000463675	TRAV5	A0A0B4J249	113 aa		11.08	□□□□□ -0.64
SNU13-205	ENST00000463675	CASC10	Q5T4H9	136 aa		11.08	□□□□□ -0.64
SNU13-205	ENST00000463675	MORN3	Q6PF18	240 aa	Predicted RBP	11.08	□□□□□ -0.64
SNU13-205	ENST00000463675	FOXI2	Q6ZQN5	318 aa		11.08	□□□□□ -0.64
SNU13-205	ENST00000463675		Q6ZRG5	221 aa		11.08	□□□□□ -0.64
SNU13-205	ENST00000463675	OR4B1	Q8NGF8	309 aa		11.08	□□□□□ -0.64
SNU13-205	ENST00000463675	SAV1	Q9H4B6	383 aa	Predicted RBP	11.08	□□□□□ -0.64
SNU13-205	ENST00000463675	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.08	□□□□□ -0.64
SNU13-205	ENST00000463675		A0A087X0K7	114 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	MRPS12	O15235	138 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	DEFB4A	O15263	64 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	RPL12	P30050	165 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	RPL29	P47914	159 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	PMS2P11	Q13670	270 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	SAMD13	Q5VXD3	122 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	S100A7A	Q86SG5	101 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	ZNF738	Q8NE65	137 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	OR1L4	Q8NGR5	311 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	GATAD1	Q8WUU5	269 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	ATP5S	Q99766	215 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	RARRES2	Q99969	163 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	WDR61	Q9GZS3	305 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	XCL2	Q9UBD3	114 aa		11.07	□□□□□ -0.64
SNU13-205	ENST00000463675	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.06	□□□□□ -0.64
SNU13-205	ENST00000463675	SLC17A3	O00476	420 aa		11.06	□□□□□ -0.64
SNU13-205	ENST00000463675	MPDU1	O75352	247 aa		11.06	□□□□□ -0.64
SNU13-205	ENST00000463675	ZNF705D	P0CH99	300 aa	Predicted RBP	11.06	□□□□□ -0.64
SNU13-205	ENST00000463675	ZNF705B	P0CI00	300 aa	Predicted RBP	11.06	□□□□□ -0.64
SNU13-205	ENST00000463675	OXA1L	Q15070	435 aa		11.06	□□□□□ -0.64
SNU13-205	ENST00000463675	PFDN5	Q99471	154 aa		11.06	□□□□□ -0.64
SNU13-205	ENST00000463675	SLC35B3	Q9H1N7	401 aa		11.06	□□□□□ -0.64

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