RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 YTHDF2Q9Y5A9 579 aaKnown RBP4.74□□□□□ -1.65
CLK1-207ENST00000461981 FLNCQ14315 2725 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 MED12Q93074 2177 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 IGLV1-36A0A0B4J1U3 117 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 IGKV1-9A0A0C4DH69 117 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 TEX50A0A1B0GTY4 177 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 SNCGO76070 127 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 IGKV1D-16P01601 117 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 CT62P0C5K7 136 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 B4GALT1P15291 398 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 OR4X2Q8NGF9 303 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 C10orf35Q96D05 121 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 DNAJC30Q96LL9 226 aa4.74□□□□□ -1.65
CLK1-207ENST00000461981 IGLL5B9A064 214 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 ENSAO43768 121 aaKnown RBP4.73□□□□□ -1.65
CLK1-207ENST00000461981 EDN2P20800 178 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 EMP1P54849 157 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 FOXF2Q12947 444 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 TMEM78Q5T7P6 136 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 CBLN3Q6UW01 205 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 SFTA2Q6UW10 78 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 FAM168AQ92567 244 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 PLPPR2Q96GM1 343 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 MDFIQ99750 246 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.73□□□□□ -1.65
CLK1-207ENST00000461981 E9PLD3 99 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 SPATA46Q5T0L3 261 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 LINC01545Q5VT33 79 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 Q6ZR03 302 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 OR9G4Q8NGQ1 327 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 CFHR4Q92496 578 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 NPCDR1Q9BY65 106 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 CCL28Q9NRJ3 127 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 DUSP13Q9UII6 198 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 LAMA1P25391 3075 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 ABCA2Q9BZC7 2435 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 SHISA9B4DS77 424 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 INAFM1C9JVW0 142 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 RRHO14718 337 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 MOSP00540 346 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 IGHV4-31P0DP07 118 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 SRD5A1P18405 259 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 OPRK1P41145 380 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 SRSF9Q13242 221 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLK1-207ENST00000461981 KLF5Q13887 457 aaPredicted RBP4.73□□□□□ -1.65
CLK1-207ENST00000461981 Q6ZQT7 251 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 OR8A1Q8NGG7 326 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 TIMM9Q9Y5J7 89 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 FBN2P35556 2912 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 TANC2Q9HCD6 1990 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 PIEZO2Q9H5I5 2752 aa4.73□□□□□ -1.65
CLK1-207ENST00000461981 CNTRLQ7Z7A1 2325 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 CR1P17927 2039 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 IZUMO1RA6ND01 250 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 A8MWL6 223 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 IGHV4-39P01824 125 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 OR5AL1P0C617 328 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 CLRN1P58418 232 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 ZNF816Q0VGE8 651 aaPredicted RBP4.72□□□□□ -1.65
CLK1-207ENST00000461981 OR4C3Q8NH37 302 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
CLK1-207ENST00000461981 ASCL2Q99929 193 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 TMEM126AQ9H061 195 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 SLC25A15Q9Y619 301 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 IGKV1D-13A0A0B4J2D9 117 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 C9JAW5 83 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 FAM90A26D6RGX4 464 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 SPRY1O43609 319 aaPredicted RBP4.72□□□□□ -1.65
CLK1-207ENST00000461981 IGKV1-13P0DP09 117 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 SMCPP49901 116 aaPredicted RBP4.72□□□□□ -1.65
CLK1-207ENST00000461981 ERVK11-1P61568 191 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 GNG5P63218 68 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 FAM234AQ9H0X4 552 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 ZNF355PQ9NSJ1 428 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 HIGD1AQ9Y241 93 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 SPTBN1Q01082 2364 aaKnown RBP4.72□□□□□ -1.65
CLK1-207ENST00000461981 OTOGQ6ZRI0 2925 aa4.72□□□□□ -1.65
CLK1-207ENST00000461981 C5orf49A4QMS7 147 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 F8WDY8 70 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 MYOD1P15172 320 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 RPL27P61353 136 aaKnown RBP4.71□□□□□ -1.65
CLK1-207ENST00000461981 FAM27E3Q08E93 113 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 ZNF524Q96C55 264 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 SGK494Q96LW2 274 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 PRRG4Q9BZD6 226 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 APCP25054 2843 aa4.71□□□□□ -1.65
CLK1-207ENST00000461981 IGKV1D-43A0A0B4J1Z2 117 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 LTAP01374 205 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 PIGYQ3MUY2 71 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 SPINK9Q5DT21 86 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 ZNF645Q8N7E2 425 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 LINC01356Q8N9X3 169 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 CARD19Q96LW7 228 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 TMEM147Q9BVK8 224 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 FBXL15Q9H469 300 aa4.71□□□□□ -1.66
CLK1-207ENST00000461981 IL36RNQ9UBH0 155 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms