RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 C11orf45Q8TAV5 145 aa12.78□□□□□ -0.36
SCARNA2-201ENST00000458748 CLUHP3Q96NS8 147 aa12.78□□□□□ -0.36
SCARNA2-201ENST00000458748 SHANK2-AS3Q9BTD1 123 aa12.78□□□□□ -0.36
SCARNA2-201ENST00000458748 ARL6Q9H0F7 186 aa12.78□□□□□ -0.36
SCARNA2-201ENST00000458748 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
SCARNA2-201ENST00000458748 INMT-MINDY4F8WBC2 141 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 SOCS3O14543 225 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 AGPAT2O15120 278 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 C4BPBP20851 252 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 SULT1A1P50225 295 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 CYCSP99999 105 aaKnown RBP12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 Q6ZRG5 221 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 LYSTQ99698 3801 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 SCRT1Q9BWW7 348 aa12.77□□□□□ -0.37
SCARNA2-201ENST00000458748 DNAH1Q9P2D7 4330 aa12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 AGRNO00468 2067 aa12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 ELOA3CA0A087WX78 387 aaPredicted RBP12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 GIG44P09565 113 aaPredicted RBP12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 EWSR1Q01844 656 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 NRARPQ7Z6K4 114 aa12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 OR4B1Q8NGF8 309 aa12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 ARV1Q9H2C2 271 aa12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 UQCC1Q9NVA1 299 aa12.76□□□□□ -0.37
SCARNA2-201ENST00000458748 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 ZNF705EA8MWA4 302 aaPredicted RBP12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 COX7A2P2O60397 106 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 CST7O76096 145 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 CAMLGP49069 296 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 IFITM3Q01628 133 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 FGL1Q08830 312 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 ARL16Q0P5N6 197 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 RAB32Q13637 225 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 LRRC20Q8TCA0 184 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
SCARNA2-201ENST00000458748 PSG9Q00887 426 aa12.74□□□□□ -0.37
SCARNA2-201ENST00000458748 IL15RAQ13261 267 aa12.74□□□□□ -0.37
SCARNA2-201ENST00000458748 CSNK1G2-AS1Q8NCQ2 148 aa12.74□□□□□ -0.37
SCARNA2-201ENST00000458748 MARVELD1Q9BSK0 173 aa12.74□□□□□ -0.37
SCARNA2-201ENST00000458748 NMES1Q9C002 83 aa12.74□□□□□ -0.37
SCARNA2-201ENST00000458748 SLC25A31Q9H0C2 315 aa12.74□□□□□ -0.37
SCARNA2-201ENST00000458748 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
SCARNA2-201ENST00000458748 DUSP14O95147 198 aaKnown RBP12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 IGKV3-20P01619 116 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 LINC00305Q7Z4B0 112 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 TMEM252Q8N6L7 170 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 Q8NAQ8 132 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 OR1L4Q8NGR5 311 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 PHLDA1Q8WV24 401 aaPredicted RBP12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 UHRF2Q96PU4 802 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 PFDN5Q99471 154 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 MGST2Q99735 147 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 HRH4Q9H3N8 390 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 C11orf1Q9H5F2 150 aa12.73□□□□□ -0.37
SCARNA2-201ENST00000458748 EPPK1P58107 5090 aaKnown RBP12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 A0A087X0K7 114 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 IGHV4-28A0A0C4DH34 117 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 A0A0J9YX75 114 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 SMIM9A6NGZ8 99 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 E5RGE8 158 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 SSNA1O43805 119 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 MPDU1O75352 247 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 BAXQ07812 192 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 VWC2Q2TAL6 325 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 GDF5OSQ5U4N7 250 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 FAM78BQ5VT40 261 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 C10orf113Q5VZT2 155 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 BPIFA4PQ86YQ2 179 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
SCARNA2-201ENST00000458748 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 DEFB4AO15263 64 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 AMBPP02760 352 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 PET100P0DJ07 73 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 CXCL2P19875 107 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 NANOS2P60321 138 aaKnown RBP12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 ZNF738Q8NE65 137 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 DNAJC4Q9NNZ3 241 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 GOLT1BQ9Y3E0 138 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 X6R8D5 127 aa12.71□□□□□ -0.37
SCARNA2-201ENST00000458748 UBE2L5PA0A1B0GUS4 154 aa12.7□□□□□ -0.38
SCARNA2-201ENST00000458748 IGSF23A1L1A6 192 aa12.7□□□□□ -0.38
SCARNA2-201ENST00000458748 TMEM189A5PLL7 270 aa12.7□□□□□ -0.38
SCARNA2-201ENST00000458748 LCN15Q6UWW0 184 aa12.7□□□□□ -0.38
SCARNA2-201ENST00000458748 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
SCARNA2-201ENST00000458748 NEU1Q99519 415 aa12.7□□□□□ -0.38
SCARNA2-201ENST00000458748 F6UB75 175 aa12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 FGF7P21781 194 aa12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 RPL29P47914 159 aaKnown RBP12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 TCTAP57738 103 aa12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 CHAC2Q8WUX2 184 aa12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 SLC50A1Q9BRV3 221 aa12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 PPP1R14DQ9NXH3 145 aa12.69□□□□□ -0.38
SCARNA2-201ENST00000458748 BIRC6Q9NR09 4857 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 SIX6O95475 246 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 RBMY1A1P0DJD3 496 aaKnown RBP12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 RBMY1CP0DJD4 496 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 FXYD7P58549 80 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms