RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ASIPP42127 132 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 PSG3Q16557 428 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 OR4X2Q8NGF9 303 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 OR1N2Q8NGR9 330 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 IFI27L1Q96BM0 104 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 SRRM4A7MD48 611 aaKnown RBP13.43□□□□□ -0.26
TCOF1-206ENST00000445265 CACNG7P62955 275 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 LY6EQ16553 131 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 PTPRSQ13332 1948 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 M0R381 172 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 M0R3E3 92 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 HTN1P15515 57 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 KIR2DL4Q99706 377 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 TTC28Q96AY4 2481 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 LEPP41159 167 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 TTC9CQ8N5M4 171 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 FAM215AQ9Y5M1 114 aa13.43□□□□□ -0.26
TCOF1-206ENST00000445265 RPL13AP40429 203 aaKnown RBP13.43□□□□□ -0.26
TCOF1-206ENST00000445265 COL6A6A6NMZ7 2263 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 NPIPB5A8MRT5 1133 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 FAM159AQ6UWV7 190 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 SHANK2-AS3Q9BTD1 123 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 E7EQL1 145 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 K7EN84 100 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 SEC11AP67812 179 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 MRPS16Q9Y3D3 137 aaKnown RBP13.42□□□□□ -0.26
TCOF1-206ENST00000445265 M0R1W7 72 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 MINOS1Q5TGZ0 78 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 MINOS1-NBL1R4GNA1 71 aa13.42□□□□□ -0.26
TCOF1-206ENST00000445265 SPTAN1Q13813 2472 aaKnown RBP13.41□□□□□ -0.26
TCOF1-206ENST00000445265 LOXP28300 417 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-206ENST00000445265 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-206ENST00000445265 MALRD1Q5VYJ5 2156 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 D6R8Y8 96 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 PDE6HQ13956 83 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 A0A0G2JLM5 398 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 MED13Q9UHV7 2174 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 IGHV3OR16-10A0A075B7F0 116 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 IGKV2-40A0A087WW87 121 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-206ENST00000445265 IGKV2D-40P01614 121 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-206ENST00000445265 LINC01559Q495D7 138 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 PRR31Q5SQ13 230 aa13.41□□□□□ -0.26
TCOF1-206ENST00000445265 PLCE1Q9P212 2302 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-206ENST00000445265 ODF3L1Q8IXM7 274 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 THAP8Q8NA92 274 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 LHBP01229 141 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 SLAQ13239 276 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 IGFL2Q6UWQ7 119 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 SCGB3A1Q96QR1 104 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 NUP210LQ5VU65 1888 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 ATP5J2P56134 94 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 VMO1Q7Z5L0 202 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 C5orf30Q96GV9 206 aa13.4□□□□□ -0.26
TCOF1-206ENST00000445265 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 TEX43Q6ZNM6 134 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 KIR3DL3Q8N743 410 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 ORAOV1Q8WV07 137 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 hDV102S1A0JD36 115 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 COL8A2P25067 703 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 OR9G4Q8NGQ1 327 aa13.39□□□□□ -0.27
TCOF1-206ENST00000445265 IGLC2P0DOY2 106 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 IGLC3P0DOY3 106 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 DDB2Q92466 427 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 KLRD1Q13241 179 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 C15orf32Q32M92 178 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 SPCS1Q9Y6A9 102 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 FXYD5Q96DB9 178 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 H3BUT2 72 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 SH2D1AO60880 128 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 DPM2O94777 84 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 SNRPD3P62318 126 aaKnown RBP13.38□□□□□ -0.27
TCOF1-206ENST00000445265 HSD52Q0P140 79 aa13.38□□□□□ -0.27
TCOF1-206ENST00000445265 P0C879 139 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 MPV17L2Q567V2 206 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 PAX1P15863 534 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 ZNF138P52744 262 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 TMEM75Q8N9X5 138 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 DYNLRB2Q8TF09 96 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 PRTN3P24158 256 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 C8orf31Q8N9H6 132 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 PPIFP30405 207 aaKnown RBP13.37□□□□□ -0.27
TCOF1-206ENST00000445265 PIP4P1Q86T03 277 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 KAAG1Q9UBP8 84 aa13.37□□□□□ -0.27
TCOF1-206ENST00000445265 ARMS2P0C7Q2 107 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 TMEM14CQ9P0S9 112 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 SMPXQ9UHP9 88 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 ZGRF1Q86YA3 2104 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 NPIPB6E9PJ23 425 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 SRSF1Q07955 248 aaKnown RBP eCLIP13.36□□□□□ -0.27
TCOF1-206ENST00000445265 FNDC4Q9H6D8 234 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-206ENST00000445265 PRB4P10163 310 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-206ENST00000445265 LGALS3P17931 250 aaKnown RBP13.36□□□□□ -0.27
TCOF1-206ENST00000445265 SAMD13Q5VXD3 122 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 ZNF295-AS1Q8N0V1 137 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 TRBV19A0A075B6N1 114 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 TRAV21A0A0B4J279 112 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 CNTFRP26992 372 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms