RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TMEM88Q6PEY1 159 aa9.79□□□□□ -0.84
PTPRE-203ENST00000442830 TMED4Q7Z7H5 227 aa9.79□□□□□ -0.84
PTPRE-203ENST00000442830 RSG1Q9BU20 258 aa9.79□□□□□ -0.84
PTPRE-203ENST00000442830 SLC25A32Q9H2D1 315 aa9.79□□□□□ -0.84
PTPRE-203ENST00000442830 PCLOQ9Y6V0 5065 aa9.79□□□□□ -0.84
PTPRE-203ENST00000442830 IGLV2-18A0A075B6J9 118 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 IGKV1OR2-108A0A075B7D4 117 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 F6UB75 175 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 VAMP1P23763 118 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 DEFB1P60022 68 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 UBE2MP61081 183 aaKnown RBP9.78□□□□□ -0.84
PTPRE-203ENST00000442830 RAP2BP61225 183 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 SELENOTP62341 195 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 AMTNQ6UX39 209 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 TOMM5Q8N4H5 51 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 SOSTQ9BQB4 213 aa9.78□□□□□ -0.84
PTPRE-203ENST00000442830 STRAPQ9Y3F4 350 aaKnown RBP9.78□□□□□ -0.84
PTPRE-203ENST00000442830 ORM2P19652 201 aa9.77□□□□□ -0.85
PTPRE-203ENST00000442830 CNN1P51911 297 aaKnown RBP9.77□□□□□ -0.85
PTPRE-203ENST00000442830 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
PTPRE-203ENST00000442830 TMEM144Q7Z5S9 345 aa9.77□□□□□ -0.85
PTPRE-203ENST00000442830 OR11H7Q8NGC8 314 aa9.77□□□□□ -0.85
PTPRE-203ENST00000442830 PRSS46E5RG02 174 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 BOLA2-SMG1P6H3BVE0 249 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 SFT2D2O95562 160 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 TNFSF8P32971 234 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 SPANXN5Q5MJ07 72 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 C20orf173Q96LM9 149 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 SLIRPQ9GZT3 109 aaKnown RBP9.76□□□□□ -0.85
PTPRE-203ENST00000442830 PPP1R14DQ9NXH3 145 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 HIGD1AQ9Y241 93 aa9.76□□□□□ -0.85
PTPRE-203ENST00000442830 FNDC10F2Z333 226 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 H3BRN7 92 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 WRBO00258 174 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 ATP5G1P05496 136 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 CXCL2P19875 107 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 ATP5G3P48201 142 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 CCL18P55774 89 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 PLP1P60201 277 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 PXDC1Q5TGL8 231 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 ZNF738Q8NE65 137 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 MCFD2Q8NI22 146 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 C16orf74Q96GX8 76 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 SHANK2-AS3Q9BTD1 123 aa9.75□□□□□ -0.85
PTPRE-203ENST00000442830 SLC25A39Q9BZJ4 359 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-203ENST00000442830 A0A087X0K7 114 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 M0R2Z0 102 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 HYPMO75409 117 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 ADAP1O75689 374 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 IL5P05113 134 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 S100A5P33763 92 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 TAS2R60P59551 318 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 SPINK13Q1W4C9 94 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 PYDC2Q56P42 97 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 ZNF493Q6ZR52 646 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 CYP2G1PQ6ZSU1 146 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 ACOT7LQ6ZUV0 252 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 LRRC20Q8TCA0 184 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 TRIM63Q969Q1 353 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 C20orf144Q9BQM9 153 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 DNAH11Q96DT5 4516 aa9.74□□□□□ -0.85
PTPRE-203ENST00000442830 PKD1P98161 4303 aa9.73□□□□□ -0.85
PTPRE-203ENST00000442830 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
PTPRE-203ENST00000442830 CBY3A6NI87 242 aa9.73□□□□□ -0.85
PTPRE-203ENST00000442830 CRXO43186 299 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-203ENST00000442830 FGL1Q08830 312 aa9.73□□□□□ -0.85
PTPRE-203ENST00000442830 PPP1R1AQ13522 171 aa9.73□□□□□ -0.85
PTPRE-203ENST00000442830 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
PTPRE-203ENST00000442830 TIMM8BQ9Y5J9 83 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-203ENST00000442830 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 ZNF705GA8MUZ8 300 aaPredicted RBP9.72□□□□□ -0.85
PTPRE-203ENST00000442830 F5H768 121 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 H3BMQ9 156 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 LCE2BO14633 110 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 HOXB5P09067 269 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 LINC00869P0C866 280 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 DEFB130BP0DP73 79 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 DEFB130AP0DP74 79 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 RHOBP62745 196 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 DLK1P80370 383 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 ID3Q02535 119 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 OR8A1Q8NGG7 326 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 LINC01587Q99440 93 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 MGAT4CQ9UBM8 478 aa9.72□□□□□ -0.85
PTPRE-203ENST00000442830 TRAV8-2A0A0B4J237 113 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 K7EPK0 472 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 CDK2AP2O75956 126 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 NUDT3O95989 172 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 OR5G3P0C626 314 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.86
PTPRE-203ENST00000442830 CDKN1BP46527 198 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 HIST1H1AQ02539 215 aaPredicted RBP9.71□□□□□ -0.86
PTPRE-203ENST00000442830 CLINT1Q14677 625 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 PSG3Q16557 428 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 TTC32Q5I0X7 151 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 LCN15Q6UWW0 184 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 BAP18Q8IXM2 172 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 RNF182Q8N6D2 247 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 TMEM263Q8WUH6 116 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms