RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 C4BPBP20851 252 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 PAX9P55771 341 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 AKR1C1Q04828 323 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 SPANXN5Q5MJ07 72 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 PXDC1Q5TGL8 231 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 TMEM144Q7Z5S9 345 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 TMEM208Q9BTX3 173 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 PPP1R14DQ9NXH3 145 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 CLEC5AQ9NY25 188 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 HOXB5P09067 269 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 IAPPP10997 89 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 ZNF90Q03938 601 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 OR2F1Q13607 317 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 ZNF705AQ6ZN79 300 aaPredicted RBP5.61□□□□□ -1.51
CD44-211ENST00000442151 LRRC20Q8TCA0 184 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 NIPSNAP3BQ9BS92 247 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 NPVFQ9HCQ7 196 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 PSENENQ9NZ42 101 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 DOK5Q9P104 306 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 MGAT4CQ9UBM8 478 aa5.61□□□□□ -1.51
CD44-211ENST00000442151 ZNF98A6NK75 572 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 HYPMO75409 117 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 IL5P05113 134 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 ORM2P19652 201 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 TAS2R30P59541 319 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 RAB31Q13636 194 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 ZNF79Q15937 498 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 C12orf74Q32Q52 190 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 SOHLH1Q5JUK2 328 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 Q6ZTC4 211 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 POM121L12Q8N7R1 296 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 OR10P1Q8NGE3 313 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 SMIM8Q96KF7 97 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 RSG1Q9BU20 258 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 HIGD1AQ9Y241 93 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 IGKV1D-37A0A075B6S9 117 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 IGHV3OR16-12A0A075B7B8 117 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 A0A0J9YX75 114 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 C9orf170A2RU37 121 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 SMCO3A2RU48 225 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 ZNF705FA8MVS1 300 aaPredicted RBP5.6□□□□□ -1.51
CD44-211ENST00000442151 IGKV3-20P01619 116 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 ZNF705DP0CH99 300 aaPredicted RBP5.6□□□□□ -1.51
CD44-211ENST00000442151 ZNF705BP0CI00 300 aaPredicted RBP5.6□□□□□ -1.51
CD44-211ENST00000442151 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
CD44-211ENST00000442151 ID3Q02535 119 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 PPP1R1AQ13522 171 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 GSG1LQ6UXU4 331 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 CYP2G1PQ6ZSU1 146 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 UBE2DNLQ8IWF7 75 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 RPP25LQ8N5L8 163 aaKnown RBP5.6□□□□□ -1.51
CD44-211ENST00000442151 TRIM63Q969Q1 353 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 IGF2BP2-AS1Q96M15 143 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 GGACTQ9BVM4 153 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 SLC25A22Q9H936 323 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 PRR13Q9NZ81 148 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 NDUFA13Q9P0J0 144 aa5.6□□□□□ -1.51
CD44-211ENST00000442151 L7N2F9 121 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 DEDDO75618 318 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 PLP1P60201 277 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 VAMP2P63027 116 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 SUMO1P63165 101 aaKnown RBP5.59□□□□□ -1.51
CD44-211ENST00000442151 DLK1P80370 383 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 ZNF846Q147U1 533 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 RNF212Q495C1 297 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 FAM78BQ5VT40 261 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 CCDC190Q86UF4 302 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 TMEM256Q8N2U0 113 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 C15orf53Q8NAA6 179 aa5.59□□□□□ -1.51
CD44-211ENST00000442151 LOC102723971A0A1B0GUV8 181 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 LYRM9A8MSI8 78 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 SOCS3O14543 225 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 GOSR2O14653 212 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 TSC22D2O75157 780 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 NDUFB6O95139 128 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 INSP01308 110 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 OR5G3P0C626 314 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 CXCL2P19875 107 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 ANXA7P20073 488 aaKnown RBP5.58□□□□□ -1.52
CD44-211ENST00000442151 EMP1P54849 157 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 DAD1P61803 113 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 POLR2GP62487 172 aaKnown RBP eCLIP5.58□□□□□ -1.52
CD44-211ENST00000442151 TEPPQ6URK8 271 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 WDR12Q9GZL7 423 aaKnown RBP5.58□□□□□ -1.52
CD44-211ENST00000442151 SLC25A32Q9H2D1 315 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 V9GYH0 126 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 ADAP1O75689 374 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 OR4E1P0C645 316 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 PVALBP20472 110 aaPredicted RBP5.58□□□□□ -1.52
CD44-211ENST00000442151 TSPOP30536 169 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 RHOBP62745 196 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 LGALS9BQ3B8N2 356 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 ZNF546Q86UE3 836 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 C12orf45Q8N5I9 185 aaPredicted RBP5.58□□□□□ -1.52
CD44-211ENST00000442151 SHANK2-AS3Q9BTD1 123 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 SLC25A39Q9BZJ4 359 aaPredicted RBP5.58□□□□□ -1.52
CD44-211ENST00000442151 DKK2Q9UBU2 259 aa5.58□□□□□ -1.52
CD44-211ENST00000442151 A8MTW9 85 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms